RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 EYA4O95677 639 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 RPL13P26373 211 aaKnown RBP17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 ANXA13P27216 316 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 HOXA13P31271 388 aaPredicted RBP17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 KLHL7Q8IXQ5 586 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 WHAMMQ8TF30 809 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 SCFD2Q8WU76 684 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 BORCS6Q96GS4 357 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 PBKQ96KB5 322 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 EIF2AK1Q9BQI3 630 aaKnown RBP17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 MRIQ9BWK5 157 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
SEMA4D-220ENST00000492386 ANKRD65E5RJM6 399 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 GCNT3O95395 438 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 POLD1P28340 1107 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 MAGEA9P43362 315 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 NOP2P46087 812 aaKnown RBP17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 IFI16Q16666 785 aaKnown RBP17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 TCERG1LQ5VWI1 586 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 SH2D3CQ8N5H7 860 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 TPCN2Q8NHX9 752 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 ACTRT1Q8TDG2 376 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 OLFML3Q9NRN5 406 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 RGL1Q9NZL6 768 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 GCNT4Q9P109 453 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 RABGAP1Q9Y3P9 1069 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 ZMYM2Q9UBW7 1377 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 UBAP1LF5GYI3 381 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 CLIC2O15247 247 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 TGFB1I1O43294 461 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 TBCAO75347 108 aaKnown RBP17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 FLOT1O75955 427 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 CYP3A4P08684 503 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 SKIDA1Q1XH10 827 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 TTC19Q6DKK2 380 aaPredicted RBP17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 GJB7Q6PEY0 223 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 PODNQ7Z5L7 613 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 CD302Q8IX05 232 aa17.62■□□□□ 0.41
SEMA4D-220ENST00000492386 GTPBP10A4D1E9 387 aaKnown RBP17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 CCT5P48643 541 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 JAG1P78504 1218 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 ABCB5Q2M3G0 1257 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 KCTD16Q68DU8 428 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 RINT1Q6NUQ1 792 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 IKZF4Q9H2S9 585 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 RBBP6Q7Z6E9 1792 aaKnown RBP17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 IGLV3-22A0A075B6J6 115 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 DDX3XO00571 662 aaKnown RBP eCLIP17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 ECHS1P30084 290 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 ALDH1B1P30837 517 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 ERVK-9P63128 1117 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 IKQ13123 557 aaPredicted RBP17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 BTNL9Q6UXG8 535 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 SLFN11Q7Z7L1 901 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 OLIG1Q8TAK6 271 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 BCAS4Q8TDM0 211 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 ISCUQ9H1K1 167 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 TAF1DQ9H5J8 278 aaPredicted RBP17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 PCDHB13Q9Y5F0 798 aa17.61■□□□□ 0.41
SEMA4D-220ENST00000492386 SFI1A8K8P3 1242 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 BHMG1C9JSJ3 638 aaPredicted RBP17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 CEP104O60308 925 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 NPM3O75607 178 aaKnown RBP17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 BMP3P12645 472 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 GAP43P17677 238 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 HSPA9P38646 679 aaKnown RBP17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 PTPROQ16827 1216 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 METTL13Q8N6R0 699 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 EIF1ADQ8N9N8 165 aaKnown RBP17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.6■□□□□ 0.418e-7■■■■□ 26.4
SEMA4D-220ENST00000492386 HSD17B14Q9BPX1 270 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 STXBP5LQ9Y2K9 1186 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 SLX4Q8IY92 1834 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 A0A0A6YYK5 440 aaPredicted RBP17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 PIK3CDO00329 1044 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 H2AFZP0C0S5 128 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 RBM5P52756 815 aaKnown RBP eCLIP17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 HDLBPQ00341 1268 aaKnown RBP17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 SLC15A2Q16348 729 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 DACT2Q5SW24 774 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 EMC10Q5UCC4 262 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 H2AFVQ71UI9 128 aa17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 CALR3Q96L12 384 aaKnown RBP17.6■□□□□ 0.41
SEMA4D-220ENST00000492386 EIF3DO15371 548 aaKnown RBP eCLIP17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 ZNF76P36508 570 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 PDCLQ13371 301 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 CTTNQ14247 550 aaKnown RBP17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 KDM7AQ6ZMT4 941 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 VPS36Q86VN1 386 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 KCTD17Q8N5Z5 321 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 PIGOQ8TEQ8 1089 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 RABEP2Q9H5N1 569 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 INTUQ9ULD6 942 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 A6NNZ2 444 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 PGRMC1O00264 195 aaKnown RBP17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 FERP16591 822 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 NMT1P30419 496 aaKnown RBP17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 TUBB8Q3ZCM7 444 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 STRIP1Q5VSL9 837 aa17.59■□□□□ 0.41
SEMA4D-220ENST00000492386 SLC30A10Q6XR72 485 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms