RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 RPLP2P05387 115 aaKnown RBP10.72□□□□□ -0.69
USP54-214ENST00000492357 KRT18P05783 430 aaKnown RBP10.72□□□□□ -0.69
USP54-214ENST00000492357 PRR29P0C7W0 189 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 CYBAP13498 195 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 DGKDQ16760 1214 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 HSDL1Q3SXM5 330 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 MAP3K21Q5TCX8 1036 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 PADI6Q6TGC4 694 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 EEPD1Q7L9B9 569 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 GUF1Q8N442 669 aaKnown RBP10.72□□□□□ -0.69
USP54-214ENST00000492357 BANK1Q8NDB2 785 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 ATP8B4Q8TF62 1192 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 KIFAP3Q92845 792 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 HVCN1Q96D96 273 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 DHTKD1Q96HY7 919 aaPredicted RBP10.72□□□□□ -0.69
USP54-214ENST00000492357 UPF3AQ9H1J1 476 aaKnown RBP10.72□□□□□ -0.69
USP54-214ENST00000492357 ST6GALNAC4Q9H4F1 302 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 SPC25Q9HBM1 224 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 ZHX1Q9UKY1 873 aaPredicted RBP10.72□□□□□ -0.69
USP54-214ENST00000492357 BICDL2A1A5D9 508 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 PSMA7O14818 248 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 EIF3DO15371 548 aaKnown RBP eCLIP10.71□□□□□ -0.69
USP54-214ENST00000492357 ZNF862O60290 1169 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 STBD1O95210 358 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 SMPD1P17405 629 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 CTGFP29279 349 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 ADCYAP1R1P41586 468 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 SNRPFP62306 86 aaKnown RBP10.71□□□□□ -0.69
USP54-214ENST00000492357 PSMC6P62333 389 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 PRKCEQ02156 737 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 PRKCZQ05513 592 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 GIT2Q14161 759 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 HSP90AA2PQ14568 343 aaPredicted RBP10.71□□□□□ -0.69
USP54-214ENST00000492357 TARBP2Q15633 366 aaKnown RBP10.71□□□□□ -0.69
USP54-214ENST00000492357 KMT5BQ4FZB7 885 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 ANO6Q4KMQ2 910 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 XKR9Q5GH70 373 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 ZNF484Q5JVG2 852 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 FAM26FQ5R3K3 315 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 ANO5Q75V66 913 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 ENOX1Q8TC92 643 aaKnown RBP10.71□□□□□ -0.69
USP54-214ENST00000492357 TMEM174Q8WUU8 243 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 SLC7A3Q8WY07 619 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 PLIN2Q99541 437 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 KATNAL1Q9BW62 490 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 SEZ6LQ9BYH1 1024 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 AP5M1Q9H0R1 490 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 DOCK5Q9H7D0 1870 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 PARVGQ9HBI0 331 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 PDLIM7Q9NR12 457 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 CYP26B1Q9NR63 512 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 PDGFCQ9NRA1 345 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 PANK4Q9NVE7 773 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 WBP1LQ9NX94 342 aa10.71□□□□□ -0.69
USP54-214ENST00000492357 WRAP73Q9P2S5 460 aaPredicted RBP10.71□□□□□ -0.69
USP54-214ENST00000492357 RRN3P2A6NIE6 340 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 BECN2A8MW95 431 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 MAGEB2O15479 319 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 ZEB2O60315 1214 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 SSBP05455 408 aaKnown RBP eCLIP10.7□□□□□ -0.7
USP54-214ENST00000492357 MMP3P08254 477 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 CST5P28325 142 aaPredicted RBP10.7□□□□□ -0.7
USP54-214ENST00000492357 GJA9P57773 515 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 CDC42EP1Q00587 391 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 MYL5Q02045 173 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 LRRC63Q05C16 580 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 COASYQ13057 564 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 PPP2R5AQ15172 486 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 BMT2Q1RMZ1 405 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 DPCR1Q3MIW9 517 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 TLK2Q86UE8 772 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 GRAMD1CQ8IYS0 662 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 ADSSL1Q8N142 457 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 OR6J1Q8NGC5 347 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 CD99L2Q8TCZ2 262 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 PIGOQ8TEQ8 1089 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 NOC3LQ8WTT2 800 aaKnown RBP10.7□□□□□ -0.7
USP54-214ENST00000492357 SPIRE2Q8WWL2 714 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 TCP11Q8WWU5 503 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 TRIB2Q92519 343 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 GLG1Q92896 1179 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 PCYT2Q99447 389 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 REEP2Q9BRK0 252 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 NTPCRQ9BSD7 190 aaKnown RBP10.7□□□□□ -0.7
USP54-214ENST00000492357 BLZF1Q9H2G9 400 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 DHX33Q9H6R0 707 aaKnown RBP10.7□□□□□ -0.7
USP54-214ENST00000492357 ATP6V0A4Q9HBG4 840 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 FLRT1Q9NZU1 646 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 CGNQ9P2M7 1197 aaKnown RBP10.7□□□□□ -0.7
USP54-214ENST00000492357 RWDD2AQ9UIY3 292 aa10.7□□□□□ -0.7
USP54-214ENST00000492357 IGKV6-21A0A0C4DH24 114 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 GOLGA6L19H0YKK7 550 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 ASAP2O43150 1006 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 ADCY3O60266 1144 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 MAFO75444 373 aaPredicted RBP10.69□□□□□ -0.7
USP54-214ENST00000492357 FAM13AO94988 1023 aa10.69□□□□□ -0.7
USP54-214ENST00000492357 FGFR1OPO95684 399 aaKnown RBP10.69□□□□□ -0.7
USP54-214ENST00000492357 F2P00734 622 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms