RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 TTBK2Q6IQ55 1244 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 CWC27Q6UX04 472 aaKnown RBP5.27□□□□□ -1.57
CLIP4-211ENST00000491701 BNC2Q6ZN30 1099 aaPredicted RBP5.27□□□□□ -1.57
CLIP4-211ENST00000491701 DGKHQ86XP1 1220 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 NLGN2Q8NFZ4 835 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 WNT8BQ93098 351 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 NSUN4Q96CB9 384 aaKnown RBP5.27□□□□□ -1.57
CLIP4-211ENST00000491701 HOOK2Q96ED9 719 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 MEGF10Q96KG7 1140 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 RIOK1Q9BRS2 568 aaKnown RBP5.27□□□□□ -1.57
CLIP4-211ENST00000491701 EPB41L4AQ9HCS5 686 aaPredicted RBP5.27□□□□□ -1.57
CLIP4-211ENST00000491701 RAD18Q9NS91 495 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 TMEM39AQ9NV64 488 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 SLC5A4Q9NY91 659 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 TAGLN3Q9UI15 199 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 MRPS23Q9Y3D9 190 aaKnown RBP5.27□□□□□ -1.57
CLIP4-211ENST00000491701 PCDHAC2Q9Y5I4 1007 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 SCINQ9Y6U3 715 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 PDS5AQ29RF7 1337 aaKnown RBP5.27□□□□□ -1.57
CLIP4-211ENST00000491701 RFX7Q2KHR2 1363 aa5.27□□□□□ -1.57
CLIP4-211ENST00000491701 ECM29Q5VYK3 1845 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 DNAJC25-GNG10A0A024R161 153 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 CFAP69A5D8W1 941 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 SLC27A2O14975 620 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 SART1O43290 800 aaKnown RBP5.26□□□□□ -1.57
CLIP4-211ENST00000491701 ADCY3O60266 1144 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 ECEL1O95672 775 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 B3GALT4O96024 378 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 HSPD1P10809 573 aaKnown RBP5.26□□□□□ -1.57
CLIP4-211ENST00000491701 COL6A1P12109 1028 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 CPA1P15085 419 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 RPS26P62854 115 aaKnown RBP5.26□□□□□ -1.57
CLIP4-211ENST00000491701 ST5P78524 1137 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 ITKQ08881 620 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 MTMR1Q13613 665 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 MPP2Q14168 576 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 UBE3CQ15386 1083 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 MCMDC2Q4G0Z9 681 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 TTC39AQ5SRH9 613 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 MRM1Q6IN84 353 aaKnown RBP5.26□□□□□ -1.57
CLIP4-211ENST00000491701 GK5Q6ZS86 529 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 EEPD1Q7L9B9 569 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 STRA8Q7Z7C7 330 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 SPICE1Q8N0Z3 855 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 CNTROBQ8N137 903 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 MAGEB6Q8N7X4 407 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 C19orf47Q8N9M1 422 aaKnown RBP5.26□□□□□ -1.57
CLIP4-211ENST00000491701 C12orf50Q8NA57 414 aaPredicted RBP5.26□□□□□ -1.57
CLIP4-211ENST00000491701 MYRIPQ8NFW9 859 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 GATAD2BQ8WXI9 593 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 SNX21Q969T3 373 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 SMAD5Q99717 465 aaKnown RBP5.26□□□□□ -1.57
CLIP4-211ENST00000491701 PAGR1Q9BTK6 254 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 TARS2Q9BW92 718 aaKnown RBP5.26□□□□□ -1.57
CLIP4-211ENST00000491701 BRMS1Q9HCU9 246 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 PTPRHQ9HD43 1115 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 HELLSQ9NRZ9 838 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 PCMTD2Q9NV79 361 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 JAG2Q9Y219 1238 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 RBM8AQ9Y5S9 174 aaKnown RBP5.26□□□□□ -1.57
CLIP4-211ENST00000491701 XDHP47989 1333 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 CCDC171Q6TFL3 1326 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 RAD50Q92878 1312 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 ZNF532Q9HCE3 1301 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 SALL1Q9NSC2 1324 aa5.26□□□□□ -1.57
CLIP4-211ENST00000491701 FAM221AA4D161 298 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 H0YIN7 160 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 PAX4O43316 350 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 DTNBO60941 627 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 F2P00734 622 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 CYP21A2P08686 494 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 YBX3P16989 372 aaKnown RBP eCLIP5.25□□□□□ -1.57
CLIP4-211ENST00000491701 LMNB1P20700 586 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 PRDX5P30044 214 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 ALDH1B1P30837 517 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 PURAQ00577 322 aaKnown RBP5.25□□□□□ -1.57
CLIP4-211ENST00000491701 MECOMQ03112 1051 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 CLCQ05315 142 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 FNDC3BQ53EP0 1204 aaKnown RBP5.25□□□□□ -1.57
CLIP4-211ENST00000491701 RPS26P11Q5JNZ5 115 aaPredicted RBP5.25□□□□□ -1.57
CLIP4-211ENST00000491701 CCDC158Q5M9N0 1113 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 CREB3L3Q68CJ9 461 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 FDX2Q6P4F2 183 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 PRR23CQ6ZRP0 262 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 LRRC47Q8N1G4 583 aaKnown RBP5.25□□□□□ -1.57
CLIP4-211ENST00000491701 LCORLQ8N3X6 602 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 RPGRQ92834 1020 aaKnown RBP5.25□□□□□ -1.57
CLIP4-211ENST00000491701 ZNF622Q969S3 477 aaKnown RBP eCLIP5.25□□□□□ -1.57
CLIP4-211ENST00000491701 CHMP4CQ96CF2 233 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 MTMR8Q96EF0 704 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 ZHX3Q9H4I2 956 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 NCOA5Q9HCD5 579 aaKnown RBP5.25□□□□□ -1.57
CLIP4-211ENST00000491701 PGAP2Q9UHJ9 254 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 NRBP1Q9UHY1 535 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 ZNF180Q9UJW8 692 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 LZTS1Q9Y250 596 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 DDX60LQ5H9U9 1706 aaKnown RBP5.25□□□□□ -1.57
CLIP4-211ENST00000491701 MYH1P12882 1939 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 TCHHQ07283 1943 aa5.25□□□□□ -1.57
CLIP4-211ENST00000491701 LOC100289279A0A1B0GTE1 492 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms