RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 OTOP2Q7RTS6 562 aa18.25■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 C4orf19Q8IY42 314 aa18.25■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 ZSWIM4Q9H7M6 989 aa18.25■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 WRAP73Q9P2S5 460 aaPredicted RBP18.25■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 MTMR6Q9Y217 621 aa18.25■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 TMEM150BA6NC51 233 aa18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 M0QZ92 97 aa18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 FXR2P51116 673 aaKnown RBP eCLIP18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 MRPS6P82932 125 aaKnown RBP18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 TBC1D8BQ0IIM8 1120 aa18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 RESTQ13127 1097 aa18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 TARBP2Q15633 366 aaKnown RBP18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 RASIP1Q5U651 963 aa18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 CNKSR3Q6P9H4 555 aa18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 TPH2Q8IWU9 490 aa18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 NME8Q8N427 588 aa18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 HSD17B14Q9BPX1 270 aa18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 CDY2AQ9Y6F7 541 aa18.24■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 SLITRK3O94933 977 aa18.23■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 CHRNA1P02708 482 aa18.23■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 PRPHP41219 470 aa18.23■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 ATP2C1P98194 919 aaPredicted RBP18.23■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 IER5Q5VY09 327 aa18.23■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 PLA2G4FQ68DD2 849 aa18.23■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 ANO5Q75V66 913 aa18.23■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 METTL13Q8N6R0 699 aa18.23■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 ERMNQ8TAM6 284 aa18.23■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 TRPV2Q9Y5S1 764 aa18.23■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 SIP14410 1827 aa18.23■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 ZBBXA8MT70 800 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 LYPLA2O95372 231 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 TMOD1P28289 359 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 YWHABP31946 246 aaKnown RBP18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 CLCN3P51790 818 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 TMEM62Q0P6H9 643 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 EFCAB12Q6NXP0 572 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 OTUD6AQ7L8S5 288 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 KIAA0319LQ8IZA0 1049 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 LINC01465Q8N7H1 131 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 SPRYD3Q8NCJ5 442 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 CEP89Q96ST8 783 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 SH2D3AQ9BRG2 576 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 RAB34Q9BZG1 259 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 TUFT1Q9NNX1 390 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 CYP26B1Q9NR63 512 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 PPME1Q9Y570 386 aa18.22■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 SOX1O00570 391 aaPredicted RBP18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 BAIAP3O94812 1187 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 BMP15O95972 392 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 PDIA4P13667 645 aaKnown RBP18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 NPEPPSP55786 919 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 PLEKHG4Q58EX7 1191 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 HAUS3Q68CZ6 603 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 DTHD1Q6ZMT9 781 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 LRRC71Q8N4P6 559 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 IGSF22Q8N9C0 903 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 CEP170P1Q96L14 293 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 MAP7D2Q96T17 732 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 POLR3CQ9BUI4 534 aaPredicted RBP18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 OSBPL7Q9BZF2 842 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 ZSCAN16Q9H4T2 348 aaPredicted RBP18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 CXXC1Q9P0U4 656 aaPredicted RBP18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 LRWD1Q9UFC0 647 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 AKT3Q9Y243 479 aa18.21■□□□□ 0.51
MSH5-SAPCD1-206ENST00000491552 MED24O75448 989 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 SPATA31C1P0DKV0 1188 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 GHRP10912 638 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 FXR1P51114 621 aaKnown RBP eCLIP18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 PDIA5Q14554 519 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 TCTN1Q2MV58 587 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 FBXO47Q5MNV8 452 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 CATSPER3Q86XQ3 398 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 SEPT8Q92599 483 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 JPH2Q9BR39 696 aaPredicted RBP18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 CELF4Q9BZC1 486 aaKnown RBP18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 SUGCTQ9HAC7 445 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 STK24Q9Y6E0 443 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 SLC4A7Q9Y6M7 1214 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 KDM3AQ9Y4C1 1321 aa18.2■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 ARID2Q68CP9 1835 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 IGKV6-21A0A0C4DH24 114 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 MAFO75444 373 aaPredicted RBP18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 VTNP04004 478 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 RPA1P27694 616 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 RFC5P40937 340 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 POLGP54098 1239 aaPredicted RBP18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 BECN1Q14457 450 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 LPIN1Q14693 890 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 IL17AQ16552 155 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 XKR9Q5GH70 373 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 ARL6IP4Q66PJ3 421 aaKnown RBP18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 TSHZ1Q6ZSZ6 1077 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 EXOC8Q8IYI6 725 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 ZNF579Q8NAF0 562 aaKnown RBP18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 DBF4BQ8NFT6 615 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 SLC7A3Q8WY07 619 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 APBB2Q92870 758 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 PPP1R16BQ96T49 567 aa18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 IFIH1Q9BYX4 1025 aaKnown RBP18.19■□□□□ 0.5
MSH5-SAPCD1-206ENST00000491552 ANKEF1Q9NU02 776 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms