RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 RAD9AQ99638 391 aa15.37■□□□□ 0.05
CDK9-204ENST00000491521 CFAP45Q9UL16 551 aa15.37■□□□□ 0.05
CDK9-204ENST00000491521 SPTBN5Q9NRC6 3674 aaKnown RBP15.37■□□□□ 0.05
CDK9-204ENST00000491521 COL4A4P53420 1690 aaPredicted RBP15.36■□□□□ 0.05
CDK9-204ENST00000491521 CCNT1O60563 726 aaKnown RBP15.36■□□□□ 0.05
CDK9-204ENST00000491521 CCNE2O96020 404 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 TRAPPC10P48553 1259 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 TOB1P50616 345 aaPredicted RBP15.36■□□□□ 0.05
CDK9-204ENST00000491521 STAT5BP51692 787 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 TMEM62Q0P6H9 643 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 PRR16Q569H4 304 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 MARCH8Q5T0T0 291 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 ATL3Q6DD88 541 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 TAF2Q6P1X5 1199 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 TRMT1LQ7Z2T5 733 aaKnown RBP15.36■□□□□ 0.05
CDK9-204ENST00000491521 GDPD5Q8WTR4 605 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 GBP4Q96PP9 640 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 ZNF577Q9BSK1 485 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 IFIH1Q9BYX4 1025 aaKnown RBP15.36■□□□□ 0.05
CDK9-204ENST00000491521 TCEAL9Q9UHQ7 104 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 SIP14410 1827 aa15.36■□□□□ 0.05
CDK9-204ENST00000491521 POTEB3A0JP26 581 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 IPO5O00410 1097 aaKnown RBP15.35■□□□□ 0.05
CDK9-204ENST00000491521 BAG4O95429 457 aaKnown RBP15.35■□□□□ 0.05
CDK9-204ENST00000491521 MCM7P33993 719 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 USP11P51784 963 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 GRB10Q13322 594 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 NBR1Q14596 966 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 POTEBQ6S5H4 581 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 NIPA1Q7RTP0 329 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 CKAP2LQ8IYA6 745 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 USP28Q96RU2 1077 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 NAP1L4Q99733 375 aaKnown RBP15.35■□□□□ 0.05
CDK9-204ENST00000491521 THEGQ9P2T0 379 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 CEP131Q9UPN4 1083 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 PCDHB6Q9Y5E3 794 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 CLIC4Q9Y696 253 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 MTCH2Q9Y6C9 303 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 CDY2AQ9Y6F7 541 aa15.35■□□□□ 0.05
CDK9-204ENST00000491521 TTC28Q96AY4 2481 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 IGLV3-22A0A075B6J6 115 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 LINC01553A4QN01 128 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 RRN3P2A6NIE6 340 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 MARCH6O60337 910 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 CYP3A4P08684 503 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 MRPS6P82932 125 aaKnown RBP15.34■□□□□ 0.05
CDK9-204ENST00000491521 LPIN1Q14693 890 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 STK38Q15208 465 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 SF3A1Q15459 793 aaKnown RBP15.34■□□□□ 0.05
CDK9-204ENST00000491521 FAM26DQ5JW98 314 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 FAM160B1Q5W0V3 765 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 MIS18BP1Q6P0N0 1132 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 PLPPR4Q7Z2D5 763 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 SPATA32Q96LK8 384 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 TGS1Q96RS0 853 aaKnown RBP15.34■□□□□ 0.05
CDK9-204ENST00000491521 YME1L1Q96TA2 773 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 ZNF302Q9NR11 478 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 INSL6Q9Y581 213 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 LOXHD1Q8IVV2 1947 aa15.34■□□□□ 0.05
CDK9-204ENST00000491521 MYH9P35579 1960 aaKnown RBP15.33■□□□□ 0.05
CDK9-204ENST00000491521 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.33■□□□□ 0.04
CDK9-204ENST00000491521 MBLAC1A4D2B0 266 aaPredicted RBP15.33■□□□□ 0.04
CDK9-204ENST00000491521 IBSPP21815 317 aaPredicted RBP15.33■□□□□ 0.04
CDK9-204ENST00000491521 SETQ01105 290 aaPredicted RBP15.33■□□□□ 0.04
CDK9-204ENST00000491521 MGAT3Q09327 533 aa15.33■□□□□ 0.04
CDK9-204ENST00000491521 SWSAP1Q6NVH7 229 aa15.33■□□□□ 0.04
CDK9-204ENST00000491521 PDXDC2PQ6P474 469 aa15.33■□□□□ 0.04
CDK9-204ENST00000491521 ABHD15Q6UXT9 468 aa15.33■□□□□ 0.04
CDK9-204ENST00000491521 CCDC60Q8IWA6 550 aaPredicted RBP15.33■□□□□ 0.04
CDK9-204ENST00000491521 CRYGNQ8WXF5 182 aa15.33■□□□□ 0.04
CDK9-204ENST00000491521 APBB2Q92870 758 aa15.33■□□□□ 0.04
CDK9-204ENST00000491521 C17orf80Q9BSJ5 609 aa15.33■□□□□ 0.04
CDK9-204ENST00000491521 SCAND2PQ9GZW5 306 aaPredicted RBP15.33■□□□□ 0.04
CDK9-204ENST00000491521 TSPYL2Q9H2G4 693 aaPredicted RBP15.33■□□□□ 0.04
CDK9-204ENST00000491521 GDPD2Q9HCC8 539 aa15.33■□□□□ 0.04
CDK9-204ENST00000491521 SAMM50Q9Y512 469 aa15.33■□□□□ 0.04
CDK9-204ENST00000491521 M0QZ92 97 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 WNT7AO00755 349 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 DHX15O43143 795 aaKnown RBP15.32■□□□□ 0.04
CDK9-204ENST00000491521 CHMP2AO43633 222 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 TDP2O95551 362 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 GCFC2P16383 781 aaKnown RBP15.32■□□□□ 0.04
CDK9-204ENST00000491521 CD52P31358 61 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 MKRN4PQ13434 485 aaPredicted RBP15.32■□□□□ 0.04
CDK9-204ENST00000491521 CSPP1Q1MSJ5 1256 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 TPRNQ4KMQ1 711 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 TJAP1Q5JTD0 557 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 MTHFD1LQ6UB35 978 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 GJA10Q969M2 543 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 PPP1R16BQ96T49 567 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.32■□□□□ 0.04
CDK9-204ENST00000491521 DDX25Q9UHL0 483 aaKnown RBP15.32■□□□□ 0.04
CDK9-204ENST00000491521 GINS2Q9Y248 185 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 EVPLQ92817 2033 aa15.32■□□□□ 0.04
CDK9-204ENST00000491521 GOLGA6L22H0YM25 854 aa15.31■□□□□ 0.04
CDK9-204ENST00000491521 NEMFO60524 1076 aa15.31■□□□□ 0.04
CDK9-204ENST00000491521 ATG7O95352 703 aa15.31■□□□□ 0.04
CDK9-204ENST00000491521 BMP15O95972 392 aa15.31■□□□□ 0.04
CDK9-204ENST00000491521 KLRC1P26715 233 aa15.31■□□□□ 0.04
CDK9-204ENST00000491521 ERVK-21P61565 698 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms