RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 ZC3H14Q6PJT7 736 aaKnown RBP12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 CCDC105Q8IYK2 499 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 NME8Q8N427 588 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 GPR161Q8N6U8 529 aaKnown RBP12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 NECTIN4Q96NY8 510 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 AGO3Q9H9G7 860 aaKnown RBP12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 C1orf112Q9NSG2 853 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 DIAPH3Q9NSV4 1193 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 PADI3Q9ULW8 664 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 SORCS3Q9UPU3 1222 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 LZTS1Q9Y250 596 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 IGSF9BQ9UPX0 1349 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 KDM3AQ9Y4C1 1321 aa12.81□□□□□ -0.36
CLCNKA-206ENST00000491433 FGF18O76093 207 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 TECP42680 631 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 GRM4Q14833 912 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 SEC23AQ15436 765 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 CES5AQ6NT32 575 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 ANKRD54Q6NXT1 300 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 RTN4RL1Q86UN2 441 aaPredicted RBP12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 THNSL1Q8IYQ7 743 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 KREMEN2Q8NCW0 462 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 LINC01599Q8WXQ3 324 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 AZI2Q9H6S1 392 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 NGRNQ9NPE2 291 aaKnown RBP12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 TMEM260Q9NX78 707 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 ANGPTL2Q9UKU9 493 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 R4GN57 208 aa12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 FNDC1Q4ZHG4 1894 aaPredicted RBP12.8□□□□□ -0.36
CLCNKA-206ENST00000491433 RBAK-RBAKDNI3L0D1 243 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 PIK3CDO00329 1044 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 PER2O15055 1255 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 ZIC2O95409 532 aaPredicted RBP12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 NEFLP07196 543 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 LAG3P18627 525 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 MARK3P27448 753 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 IGBP1P78318 339 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 LMNB2Q03252 620 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 ITIH3Q06033 890 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 BMS1Q14692 1282 aaKnown RBP12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 MARCH8Q5T0T0 291 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 CASP10Q92851 521 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 CELF4Q9BZC1 486 aaKnown RBP12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 FAM49AQ9H0Q0 323 aaPredicted RBP12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 S1PR5Q9H228 398 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 PCDHA2Q9Y5H9 948 aa12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 BAZ2BQ9UIF8 2168 aaKnown RBP12.79□□□□□ -0.36
CLCNKA-206ENST00000491433 SMIM35A0A1B0GVV1 85 aa12.78□□□□□ -0.36
CLCNKA-206ENST00000491433 FSCN2O14926 492 aa12.78□□□□□ -0.36
CLCNKA-206ENST00000491433 INSRRP14616 1297 aa12.78□□□□□ -0.36
CLCNKA-206ENST00000491433 PPM1AP35813 382 aa12.78□□□□□ -0.36
CLCNKA-206ENST00000491433 PLCB3Q01970 1234 aa12.78□□□□□ -0.36
CLCNKA-206ENST00000491433 SART3Q15020 963 aaKnown RBP12.78□□□□□ -0.36
CLCNKA-206ENST00000491433 CWC27Q6UX04 472 aaKnown RBP12.78□□□□□ -0.36
CLCNKA-206ENST00000491433 DTWD2Q8NBA8 298 aa12.78□□□□□ -0.36
CLCNKA-206ENST00000491433 COLGALT1Q8NBJ5 622 aa12.78□□□□□ -0.36
CLCNKA-206ENST00000491433 MRPS27Q92552 414 aaKnown RBP12.78□□□□□ -0.36
CLCNKA-206ENST00000491433 ENTPD7Q9NQZ7 604 aa12.78□□□□□ -0.36
CLCNKA-206ENST00000491433 GSTTP1A0A1W2PQM5 241 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 DENND3A2RUS2 1198 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 TBKBP1A7MCY6 615 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 HOXA2O43364 376 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 KCNA2P16389 499 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 MTHFRP42898 656 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 ERVFC1P60507 584 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 KRT76Q01546 638 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 KRT17Q04695 432 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 NFX1Q12986 1120 aaKnown RBP12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 MTMR1Q13613 665 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 KCNC3Q14003 757 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 PPM1JQ5JR12 505 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 SLC24A5Q71RS6 500 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 PLCD3Q8N3E9 789 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 FLCNQ8NFG4 579 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 VN1R2Q8NFZ6 395 aa12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 RRP36Q96EU6 259 aaKnown RBP12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 SEC63Q9UGP8 760 aaKnown RBP12.77□□□□□ -0.37
CLCNKA-206ENST00000491433 MYO10Q9HD67 2058 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 IFIT3O14879 490 aaKnown RBP12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 GPR182O15218 404 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 CYTH3O43739 400 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 RPS6KA5O75582 802 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 SMARCA1P28370 1054 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 SLC26A2P50443 739 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 IRX6P78412 446 aaPredicted RBP12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 AAMPQ13685 434 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 PLPP4Q5VZY2 271 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 SYCE2Q6PIF2 218 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 USP17L6PQ6QN14 398 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 CATIPQ7Z7H3 387 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 TCF25Q9BQ70 676 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 ADAM7Q9H2U9 754 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 ELAC1Q9H777 363 aaKnown RBP12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 ATP6V0A4Q9HBG4 840 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 TSHZ2Q9NRE2 1034 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 RGS18Q9NS28 235 aa12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 TYW1Q9NV66 732 aaKnown RBP12.76□□□□□ -0.37
CLCNKA-206ENST00000491433 CARNS1A5YM72 827 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 ATP9AO75110 1047 aa12.75□□□□□ -0.37
CLCNKA-206ENST00000491433 BRD1O95696 1058 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms