RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 IFI16Q16666 785 aaKnown RBP13.43□□□□□ -0.26
FXR1-220ENST00000491062 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 LRIG3Q6UXM1 1119 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 SPATS2Q86XZ4 545 aaKnown RBP13.43□□□□□ -0.26
FXR1-220ENST00000491062 CALR3Q96L12 384 aaKnown RBP13.43□□□□□ -0.26
FXR1-220ENST00000491062 KRT12Q99456 494 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 PACSIN1Q9BY11 444 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 DHX36Q9H2U1 1008 aaKnown RBP13.43□□□□□ -0.26
FXR1-220ENST00000491062 PSTPIP2Q9H939 334 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 FBXL5Q9UKA1 691 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 KIAA1024Q9UPX6 916 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 TRAF3IP3Q9Y228 551 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 ZSCAN5CA6NGD5 496 aaPredicted RBP13.43□□□□□ -0.26
FXR1-220ENST00000491062 RAD51CO43502 376 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 KIF4AO95239 1232 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 SSBP05455 408 aaKnown RBP eCLIP13.43□□□□□ -0.26
FXR1-220ENST00000491062 ZBTB48P10074 688 aaPredicted RBP13.43□□□□□ -0.26
FXR1-220ENST00000491062 EPS15P42566 896 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 KCNH2Q12809 1159 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 ADAM9Q13443 819 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 HERC4Q5GLZ8 1057 aaPredicted RBP13.43□□□□□ -0.26
FXR1-220ENST00000491062 TTBK2Q6IQ55 1244 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 EPM2AIP1Q7L775 607 aaPredicted RBP13.43□□□□□ -0.26
FXR1-220ENST00000491062 IRF2BP2Q7Z5L9 587 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 CLEC10AQ8IUN9 316 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 SLFN12Q8IYM2 578 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 LRRC57Q8N9N7 239 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 ACTRT1Q8TDG2 376 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 TAF4BQ92750 862 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 ISCUQ9H1K1 167 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 TBC1D7Q9P0N9 293 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 ADAMTS1Q9UHI8 967 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 HDAC9Q9UKV0 1011 aa13.43□□□□□ -0.26
FXR1-220ENST00000491062 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 ADAMTSL1Q8N6G6 1762 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 SIPA1L1O43166 1804 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 NPHP3-ACAD11A0A0J9YXS1 232 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 ESYT3A0FGR9 886 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 HMGB1P1B2RPK0 211 aaPredicted RBP13.42□□□□□ -0.26
FXR1-220ENST00000491062 USP17L10C9JJH3 530 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 NR2F2P24468 414 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 SHMT1P34896 483 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 PDCLQ13371 301 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 CUL1Q13616 776 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 RPS6KA1Q15418 735 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 BMT2Q1RMZ1 405 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 ARSHQ5FYA8 562 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 TRAPPC3LQ5T215 181 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 B4GALNT4Q76KP1 1039 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 TBC1D16Q8TBP0 767 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 SCFD2Q8WU76 684 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 GJA10Q969M2 543 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 RBM17Q96I25 401 aaKnown RBP13.42□□□□□ -0.26
FXR1-220ENST00000491062 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.42□□□□□ -0.26
FXR1-220ENST00000491062 MXD3Q9BW11 206 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 ANO3Q9BYT9 981 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 TAF1DQ9H5J8 278 aaPredicted RBP13.42□□□□□ -0.26
FXR1-220ENST00000491062 SERPINB13Q9UIV8 391 aa13.42□□□□□ -0.26
FXR1-220ENST00000491062 A0A0A6YYK5 440 aaPredicted RBP13.41□□□□□ -0.26
FXR1-220ENST00000491062 VGLL3A8MV65 326 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 ANKRD65E5RJM6 399 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 TBX3O15119 743 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 SLC16A3O15427 465 aaKnown RBP13.41□□□□□ -0.26
FXR1-220ENST00000491062 MED24O75448 989 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 BBOX1O75936 387 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 KRT14P02533 472 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 AFPP02771 609 aaKnown RBP13.41□□□□□ -0.26
FXR1-220ENST00000491062 SLC10A3P09131 477 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 NR1D1P20393 614 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 EIF6P56537 245 aaKnown RBP13.41□□□□□ -0.26
FXR1-220ENST00000491062 PTK2Q05397 1052 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 SPIRE1Q08AE8 756 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 AP3B2Q13367 1082 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 TMEM132AQ24JP5 1023 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 ZNF571Q7Z3V5 609 aaPredicted RBP13.41□□□□□ -0.26
FXR1-220ENST00000491062 SULF1Q8IWU6 871 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 SH2D3CQ8N5H7 860 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 CRYGNQ8WXF5 182 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 IFT81Q8WYA0 676 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 ATP6V1G3Q96LB4 118 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 DDX4Q9NQI0 724 aaKnown RBP13.41□□□□□ -0.26
FXR1-220ENST00000491062 POLLQ9UGP5 575 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 INTUQ9ULD6 942 aa13.41□□□□□ -0.26
FXR1-220ENST00000491062 PACSIN2Q9UNF0 486 aaPredicted RBP13.41□□□□□ -0.26
FXR1-220ENST00000491062 UCHL3P15374 230 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 CD46P15529 392 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 ECHS1P30084 290 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 HOXA10P31260 410 aaPredicted RBP13.4□□□□□ -0.26
FXR1-220ENST00000491062 LSP1P33241 339 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 ERVK-9P63128 1117 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 PICALMQ13492 652 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 KNOP1Q1ED39 458 aaKnown RBP13.4□□□□□ -0.26
FXR1-220ENST00000491062 MCTP2Q6DN12 878 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 SUGP1Q8IWZ8 645 aaKnown RBP13.4□□□□□ -0.26
FXR1-220ENST00000491062 ETNPPLQ8TBG4 499 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 RNPC3Q96LT9 517 aaKnown RBP13.4□□□□□ -0.26
FXR1-220ENST00000491062 EPN3Q9H201 632 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 ARMCX3Q9UH62 379 aaPredicted RBP13.4□□□□□ -0.26
FXR1-220ENST00000491062 NAGPAQ9UK23 515 aa13.4□□□□□ -0.26
FXR1-220ENST00000491062 LTBP4Q8N2S1 1624 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms