RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 TAP1Q03518 808 aa17.15■□□□□ 0.34
COL27A1-206ENST00000490831 UGCGQ16739 394 aa17.15■□□□□ 0.34
COL27A1-206ENST00000490831 FAM43BQ6ZT52 329 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-206ENST00000490831 MIER3Q7Z3K6 550 aa17.15■□□□□ 0.34
COL27A1-206ENST00000490831 TMCO2Q7Z6W1 182 aaPredicted RBP17.15■□□□□ 0.34
COL27A1-206ENST00000490831 DIS3L2Q8IYB7 885 aaKnown RBP17.15■□□□□ 0.34
COL27A1-206ENST00000490831 HAS1Q92839 578 aa17.15■□□□□ 0.34
COL27A1-206ENST00000490831 CELF4Q9BZC1 486 aaKnown RBP17.15■□□□□ 0.34
COL27A1-206ENST00000490831 VAV3Q9UKW4 847 aa17.15■□□□□ 0.34
COL27A1-206ENST00000490831 MAGEB2O15479 319 aa17.14■□□□□ 0.33
COL27A1-206ENST00000490831 CCNT1O60563 726 aaKnown RBP17.14■□□□□ 0.33
COL27A1-206ENST00000490831 HMGN5P82970 282 aaKnown RBP17.14■□□□□ 0.33
COL27A1-206ENST00000490831 HTRA4P83105 476 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-206ENST00000490831 PRKCEQ02156 737 aa17.14■□□□□ 0.33
COL27A1-206ENST00000490831 TRIM29Q14134 588 aa17.14■□□□□ 0.33
COL27A1-206ENST00000490831 LINC01465Q8N7H1 131 aa17.14■□□□□ 0.33
COL27A1-206ENST00000490831 MAFAQ8NHW3 353 aaPredicted RBP17.14■□□□□ 0.33
COL27A1-206ENST00000490831 TOP1MTQ969P6 601 aa17.14■□□□□ 0.33
COL27A1-206ENST00000490831 AGO3Q9H9G7 860 aaKnown RBP17.14■□□□□ 0.33
COL27A1-206ENST00000490831 NRBP2Q9NSY0 501 aa17.14■□□□□ 0.33
COL27A1-206ENST00000490831 COL4A6Q14031 1691 aa17.13■□□□□ 0.33
COL27A1-206ENST00000490831 LCHNA4D1U4 455 aa17.13■□□□□ 0.33
COL27A1-206ENST00000490831 M0QZ92 97 aa17.13■□□□□ 0.33
COL27A1-206ENST00000490831 STBD1O95210 358 aa17.13■□□□□ 0.33
COL27A1-206ENST00000490831 ADGRE1Q14246 886 aa17.13■□□□□ 0.33
COL27A1-206ENST00000490831 TARBP2Q15633 366 aaKnown RBP17.13■□□□□ 0.33
COL27A1-206ENST00000490831 MYOCDQ8IZQ8 938 aa17.13■□□□□ 0.33
COL27A1-206ENST00000490831 SP7Q8TDD2 431 aaPredicted RBP17.13■□□□□ 0.33
COL27A1-206ENST00000490831 GAS2L1Q99501 681 aaPredicted RBP17.13■□□□□ 0.33
COL27A1-206ENST00000490831 ZBED2Q9BTP6 218 aa17.13■□□□□ 0.33
COL27A1-206ENST00000490831 NIFKQ9BYG3 293 aaKnown RBP17.13■□□□□ 0.33
COL27A1-206ENST00000490831 UPF2Q9HAU5 1272 aaKnown RBP17.13■□□□□ 0.33
COL27A1-206ENST00000490831 INSL6Q9Y581 213 aa17.13■□□□□ 0.33
COL27A1-206ENST00000490831 EVPLQ92817 2033 aa17.13■□□□□ 0.33
COL27A1-206ENST00000490831 PRUNE2Q8WUY3 3088 aa17.12■□□□□ 0.33
COL27A1-206ENST00000490831 EML1O00423 815 aa17.12■□□□□ 0.33
COL27A1-206ENST00000490831 POU3F3P20264 500 aaPredicted RBP17.12■□□□□ 0.33
COL27A1-206ENST00000490831 SPIRE1Q08AE8 756 aa17.12■□□□□ 0.33
COL27A1-206ENST00000490831 XKR3Q5GH77 459 aa17.12■□□□□ 0.33
COL27A1-206ENST00000490831 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
COL27A1-206ENST00000490831 ZNF710Q8N1W2 664 aa17.12■□□□□ 0.33
COL27A1-206ENST00000490831 TBC1D32Q96NH3 1257 aa17.12■□□□□ 0.33
COL27A1-206ENST00000490831 CEP89Q96ST8 783 aa17.12■□□□□ 0.33
COL27A1-206ENST00000490831 TRANK1O15050 2925 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 LINC01553A4QN01 128 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 ENPP3O14638 875 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 ST18O60284 1047 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 CD52P31358 61 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 PSMC5P62195 406 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 TMEM62Q0P6H9 643 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 SLFN12Q8IYM2 578 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 FBXO18Q8NFZ0 1043 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 C8orf76Q96K31 380 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 FTHL17Q9BXU8 183 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 PADI3Q9ULW8 664 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 TTC3P53804 2025 aa17.11■□□□□ 0.33
COL27A1-206ENST00000490831 LOXHD1Q8IVV2 1947 aa17.1■□□□□ 0.33
COL27A1-206ENST00000490831 EPOPA6NHQ4 379 aa17.1■□□□□ 0.33
COL27A1-206ENST00000490831 WNT7AO00755 349 aa17.1■□□□□ 0.33
COL27A1-206ENST00000490831 GPR32O75388 356 aa17.1■□□□□ 0.33
COL27A1-206ENST00000490831 FOSBP53539 338 aa17.1■□□□□ 0.33
COL27A1-206ENST00000490831 CRYBB1P53674 252 aaPredicted RBP17.1■□□□□ 0.33
COL27A1-206ENST00000490831 ERVK-21P61565 698 aa17.1■□□□□ 0.33
COL27A1-206ENST00000490831 SAFBQ15424 915 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL27A1-206ENST00000490831 TRMT1LQ7Z2T5 733 aaKnown RBP17.1■□□□□ 0.33
COL27A1-206ENST00000490831 CRIPAKQ8N1N5 446 aa17.1■□□□□ 0.33
COL27A1-206ENST00000490831 LINC01599Q8WXQ3 324 aa17.1■□□□□ 0.33
COL27A1-206ENST00000490831 FOXP1Q9H334 677 aaPredicted RBP17.1■□□□□ 0.33
COL27A1-206ENST00000490831 CDHR5Q9HBB8 845 aa17.1■□□□□ 0.33
COL27A1-206ENST00000490831 UNC80Q8N2C7 3258 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 IGKV6-21A0A0C4DH24 114 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 BAG4O95429 457 aaKnown RBP17.09■□□□□ 0.33
COL27A1-206ENST00000490831 P4HBP07237 508 aaKnown RBP17.09■□□□□ 0.33
COL27A1-206ENST00000490831 TMOD1P28289 359 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 QARSP47897 775 aaKnown RBP17.09■□□□□ 0.33
COL27A1-206ENST00000490831 CLCN3P51790 818 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 PAK2Q13177 524 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 EPHA7Q15375 998 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 EFCAB12Q6NXP0 572 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 FAM117BQ6P1L5 589 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 SPRED2Q7Z698 418 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 RTN4RL1Q86UN2 441 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-206ENST00000490831 METTL13Q8N6R0 699 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 BANK1Q8NDB2 785 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 SLC17A8Q8NDX2 589 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 TMEM40Q8WWA1 233 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 MTMR9Q96QG7 549 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 TGS1Q96RS0 853 aaKnown RBP17.09■□□□□ 0.33
COL27A1-206ENST00000490831 TSPYL2Q9H2G4 693 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-206ENST00000490831 ADAMTS10Q9H324 1103 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 RC3H2Q9HBD1 1191 aaKnown RBP17.09■□□□□ 0.33
COL27A1-206ENST00000490831 ERVK-5Q9HDB9 667 aa17.09■□□□□ 0.33
COL27A1-206ENST00000490831 A0A0C4DFX4 3053 aa17.08■□□□□ 0.33
COL27A1-206ENST00000490831 NEMFO60524 1076 aa17.08■□□□□ 0.32
COL27A1-206ENST00000490831 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL27A1-206ENST00000490831 CD2BP2O95400 341 aaKnown RBP17.08■□□□□ 0.32
COL27A1-206ENST00000490831 VTNP04004 478 aa17.08■□□□□ 0.32
COL27A1-206ENST00000490831 GUCY1B3Q02153 619 aa17.08■□□□□ 0.32
COL27A1-206ENST00000490831 TBC1D8BQ0IIM8 1120 aa17.08■□□□□ 0.32
COL27A1-206ENST00000490831 CALCRLQ16602 461 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms