RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 DGAT1O75907 488 aa22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 CMA1P23946 247 aa22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 DNM2P50570 870 aa22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 PTK7Q13308 1070 aa22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 ZRSR1Q15695 479 aaKnown RBP22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 XKR9Q5GH70 373 aa22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 AXDND1Q5T1B0 1012 aaPredicted RBP22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 POTEGQ6S5H5 508 aa22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 ANO5Q75V66 913 aa22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 CAGE1Q8TC20 777 aa22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 MMTAG2Q9BU76 263 aaKnown RBP22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 LRRC27Q9C0I9 530 aa22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 SETD4Q9NVD3 440 aa22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 ATP11BQ9Y2G3 1177 aa22.14■■□□□ 1.13
SHROOM3-209ENST00000490690 ARHGEF35A5YM69 484 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 PP2D1A8MPX8 630 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 PQBP1O60828 265 aaKnown RBP22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 EYA4O95677 639 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 POLGP54098 1239 aaPredicted RBP22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 GRIN1Q05586 938 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 BFSP2Q13515 415 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 TARBP2Q15633 366 aaKnown RBP22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 TRIM60Q495X7 471 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 MTERF2Q49AM1 385 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 TMEM119Q4V9L6 283 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 RRAGBQ5VZM2 374 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 RESP18Q5W5W9 173 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 NME8Q8N427 588 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 TMEM87AQ8NBN3 555 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 TIPINQ9BVW5 301 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 MAGEF1Q9HAY2 307 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 USP25Q9UHP3 1055 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 PCDHA2Q9Y5H9 948 aa22.13■■□□□ 1.13
SHROOM3-209ENST00000490690 SMIM35A0A1B0GVV1 85 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 CLTBP09497 229 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 CDC25AP30304 524 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 RARRES1P49788 294 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 IGBP1P78318 339 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 ADAM17P78536 824 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 TLE2Q04725 743 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 LRRC26Q2I0M4 334 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 GDF6Q6KF10 455 aaPredicted RBP22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 MTHFD1LQ6UB35 978 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 RPAINQ86UA6 219 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 IQUBQ8NA54 791 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 MCPH1Q8NEM0 835 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 TCP11Q8WWU5 503 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 EPSTI1Q96J88 318 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 MAP7D2Q96T17 732 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 WRAP73Q9P2S5 460 aaPredicted RBP22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 NR2E3Q9Y5X4 410 aa22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 MYH9P35579 1960 aaKnown RBP22.12■■□□□ 1.13
SHROOM3-209ENST00000490690 EVI5O60447 810 aa22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 B4GALT4O60513 344 aa22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 MAFO75444 373 aaPredicted RBP22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 STBD1O95210 358 aa22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 PARNO95453 639 aaKnown RBP22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 CD4P01730 458 aa22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 STAT6P42226 847 aa22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 GRB10Q13322 594 aa22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 TRMT1LQ7Z2T5 733 aaKnown RBP22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 SERINC5Q86VE9 423 aa22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 MRPS27Q92552 414 aaKnown RBP22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 ATP6V0A4Q9HBG4 840 aa22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 KCNG1Q9UIX4 513 aa22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 BRCA2P51587 3418 aa22.11■■□□□ 1.13
SHROOM3-209ENST00000490690 M0QZ92 97 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 PITPNM1O00562 1244 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 CYP2C9P11712 490 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 PLCG1P19174 1290 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 KLRC1P26715 233 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 RGS19P49795 217 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 AMPD3Q01432 767 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 KARSQ15046 597 aaKnown RBP22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 SPECC1Q5M775 1068 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 SHC4Q6S5L8 630 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 FAM43BQ6ZT52 329 aaPredicted RBP22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 PIGOQ8TEQ8 1089 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 LARP4BQ92615 738 aaKnown RBP22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 BHMT2Q9H2M3 363 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 DHX33Q9H6R0 707 aaKnown RBP22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 BMP2KQ9NSY1 1161 aaPredicted RBP22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 TRMT13Q9NUP7 481 aaKnown RBP22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 TMEM39AQ9NV64 488 aa22.1■■□□□ 1.13
SHROOM3-209ENST00000490690 C22orf31O95567 290 aa22.09■■□□□ 1.13
SHROOM3-209ENST00000490690 RBL2Q08999 1139 aa22.09■■□□□ 1.13
SHROOM3-209ENST00000490690 PNMA5Q96PV4 448 aa22.09■■□□□ 1.13
SHROOM3-209ENST00000490690 MTRQ99707 1265 aa22.09■■□□□ 1.13
SHROOM3-209ENST00000490690 GDPD2Q9HCC8 539 aa22.09■■□□□ 1.13
SHROOM3-209ENST00000490690 KCNH3Q9ULD8 1083 aa22.09■■□□□ 1.13
SHROOM3-209ENST00000490690 IGKV6-21A0A0C4DH24 114 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 FAM237AA0A1B0GTK4 181 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 ZBTB42B2RXF5 422 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 ASAP2O43150 1006 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 TREHO43280 583 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 MARCH8Q5T0T0 291 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 IER5Q5VY09 327 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 PLA2G4FQ68DD2 849 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 PADI6Q6TGC4 694 aa22.08■■□□□ 1.13
SHROOM3-209ENST00000490690 METTL13Q8N6R0 699 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms