RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 PTPROQ16827 1216 aa22.01■■□□□ 1.11
TNFRSF1B-202ENST00000489921 TMEM266Q2M3C6 531 aa22.01■■□□□ 1.11
TNFRSF1B-202ENST00000489921 SMAP1Q8IYB5 467 aaPredicted RBP22.01■■□□□ 1.11
TNFRSF1B-202ENST00000489921 BANK1Q8NDB2 785 aa22.01■■□□□ 1.11
TNFRSF1B-202ENST00000489921 ZNF274Q96GC6 653 aaPredicted RBP22.01■■□□□ 1.11
TNFRSF1B-202ENST00000489921 NOC2LQ9Y3T9 749 aaKnown RBP22.01■■□□□ 1.11
TNFRSF1B-202ENST00000489921 PCDHA10Q9Y5I2 948 aa22.01■■□□□ 1.11
TNFRSF1B-202ENST00000489921 GRM6O15303 877 aa22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 MGEA5O60502 916 aa22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 RB1P06400 928 aa22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 CTNNB1P35222 781 aa22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 PAK2Q13177 524 aa22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 LEXMQ3ZCV2 418 aa22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 TCEAL5Q5H9L2 206 aa22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 CCDC148Q8NFR7 591 aa22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 BBXQ8WY36 941 aaPredicted RBP22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 UPF3BQ9BZI7 483 aaKnown RBP22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 ERVK-5Q9HDB9 667 aa22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 CD320Q9NPF0 282 aa22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 CYP46A1Q9Y6A2 500 aa22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 FNDC1Q4ZHG4 1894 aaPredicted RBP22■■□□□ 1.11
TNFRSF1B-202ENST00000489921 ZNF862O60290 1169 aa21.99■■□□□ 1.11
TNFRSF1B-202ENST00000489921 USP11P51784 963 aa21.99■■□□□ 1.11
TNFRSF1B-202ENST00000489921 CAMK1Q14012 370 aa21.99■■□□□ 1.11
TNFRSF1B-202ENST00000489921 BTG3Q14201 252 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF1B-202ENST00000489921 NPAS4Q8IUM7 802 aa21.99■■□□□ 1.11
TNFRSF1B-202ENST00000489921 NEK9Q8TD19 979 aa21.99■■□□□ 1.11
TNFRSF1B-202ENST00000489921 KHSRPQ92945 711 aaKnown RBP eCLIP21.99■■□□□ 1.11
TNFRSF1B-202ENST00000489921 GABBR1Q9UBS5 961 aa21.99■■□□□ 1.11
TNFRSF1B-202ENST00000489921 MRPL42Q9Y6G3 142 aaKnown RBP21.99■■□□□ 1.11
TNFRSF1B-202ENST00000489921 GPR32O75388 356 aa21.98■■□□□ 1.11
TNFRSF1B-202ENST00000489921 PSAPP07602 524 aa21.98■■□□□ 1.11
TNFRSF1B-202ENST00000489921 KCNA5P22460 613 aa21.98■■□□□ 1.11
TNFRSF1B-202ENST00000489921 SSRP1Q08945 709 aaKnown RBP21.98■■□□□ 1.11
TNFRSF1B-202ENST00000489921 TIGD5Q53EQ6 642 aa21.98■■□□□ 1.11
TNFRSF1B-202ENST00000489921 LINC01465Q8N7H1 131 aa21.98■■□□□ 1.11
TNFRSF1B-202ENST00000489921 SLC5A5Q92911 643 aa21.98■■□□□ 1.11
TNFRSF1B-202ENST00000489921 GJA10Q969M2 543 aa21.98■■□□□ 1.11
TNFRSF1B-202ENST00000489921 AIFM3Q96NN9 605 aa21.98■■□□□ 1.11
TNFRSF1B-202ENST00000489921 NSUN3Q9H649 340 aaKnown RBP21.98■■□□□ 1.11
TNFRSF1B-202ENST00000489921 RWDD3Q9Y3V2 267 aa21.98■■□□□ 1.11
TNFRSF1B-202ENST00000489921 GATMP50440 423 aa21.97■■□□□ 1.11
TNFRSF1B-202ENST00000489921 NLRP5P59047 1200 aa21.97■■□□□ 1.11
TNFRSF1B-202ENST00000489921 KIZQ2M2Z5 673 aa21.97■■□□□ 1.11
TNFRSF1B-202ENST00000489921 TRMT1LQ7Z2T5 733 aaKnown RBP21.97■■□□□ 1.11
TNFRSF1B-202ENST00000489921 CKAP2LQ8IYA6 745 aa21.97■■□□□ 1.11
TNFRSF1B-202ENST00000489921 CMTR2Q8IYT2 770 aaKnown RBP21.97■■□□□ 1.11
TNFRSF1B-202ENST00000489921 TBCKQ8TEA7 893 aa21.97■■□□□ 1.11
TNFRSF1B-202ENST00000489921 C11orf84Q9BUA3 381 aaPredicted RBP21.97■■□□□ 1.11
TNFRSF1B-202ENST00000489921 PCDHA4Q9UN74 947 aa21.97■■□□□ 1.11
TNFRSF1B-202ENST00000489921 GINS2Q9Y248 185 aa21.97■■□□□ 1.11
TNFRSF1B-202ENST00000489921 CYP3A7-CYP3A51PA0A087WV96 503 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 VTNP04004 478 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 CYP3A7P24462 503 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 LTBRP36941 435 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 CRYBB1P53674 252 aaPredicted RBP21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 NFX1Q12986 1120 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 STK3Q13188 491 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 UGCGQ16739 394 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 B3GNT9Q6UX72 402 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 PABPC5Q96DU9 382 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 PPP1R16BQ96T49 567 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 RIT2Q99578 217 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 PLVAPQ9BX97 442 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 LMAN2LQ9H0V9 348 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 EPHX3Q9H6B9 360 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 ALG13Q9NP73 1137 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 DISC1Q9NRI5 854 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 RGS18Q9NS28 235 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 ST3GAL5Q9UNP4 418 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 PLAGL2Q9UPG8 496 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 TRIOO75962 3097 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 PLXNA4Q9HCM2 1894 aa21.96■■□□□ 1.11
TNFRSF1B-202ENST00000489921 WDR64B1ANS9 1081 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 RPS6KA5O75582 802 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 PSMD10O75832 226 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 DEXIO95424 95 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 IL9P15248 144 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 DNAJB1P25685 340 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 SARSP49591 514 aaKnown RBP21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 CTC1Q2NKJ3 1217 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 Q4G0T1 1027 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 FAM228AQ86W67 206 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 TRIM22Q8IYM9 498 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 DAGLBQ8NCG7 672 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 MBOAT7Q96N66 472 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 OSMRQ99650 979 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 UNC45AQ9H3U1 944 aa21.95■■□□□ 1.1
TNFRSF1B-202ENST00000489921 GRXCR2A6NFK2 248 aa21.94■■□□□ 1.1
TNFRSF1B-202ENST00000489921 C9IYK1 514 aa21.94■■□□□ 1.1
TNFRSF1B-202ENST00000489921 H3BQ06 376 aaPredicted RBP21.94■■□□□ 1.1
TNFRSF1B-202ENST00000489921 TDP2O95551 362 aa21.94■■□□□ 1.1
TNFRSF1B-202ENST00000489921 MMP1P03956 469 aa21.94■■□□□ 1.1
TNFRSF1B-202ENST00000489921 STAG3L1P0CL83 205 aa21.94■■□□□ 1.1
TNFRSF1B-202ENST00000489921 CLCN3P51790 818 aa21.94■■□□□ 1.1
TNFRSF1B-202ENST00000489921 HYAL1Q12794 435 aa21.94■■□□□ 1.1
TNFRSF1B-202ENST00000489921 DSC3Q14574 896 aa21.94■■□□□ 1.1
TNFRSF1B-202ENST00000489921 PAN2Q504Q3 1202 aaKnown RBP21.94■■□□□ 1.1
TNFRSF1B-202ENST00000489921 FAM178BQ8IXR5 827 aa21.94■■□□□ 1.1
TNFRSF1B-202ENST00000489921 BLIDQ8IZY5 108 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms