RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 PRR23CQ6ZRP0 262 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 RGS22Q8NE09 1264 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 IWS1Q96ST2 819 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 RMDN3Q96TC7 470 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 TMX1Q9H3N1 280 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 C1orf115Q9H7X2 142 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 IL1RAPL2Q9NP60 686 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 GPCPD1Q9NPB8 672 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 SEMA4GQ9NTN9 838 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 PAG1Q9NWQ8 432 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 PUF60Q9UHX1 559 aaKnown RBP8.52□□□□□ -1.05
COL9A1-209ENST00000489861 STX8Q9UNK0 236 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 MTF2Q9Y483 593 aaPredicted RBP8.52□□□□□ -1.05
COL9A1-209ENST00000489861 TELO2Q9Y4R8 837 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 CDY2AQ9Y6F7 541 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 ZNF462Q96JM2 2506 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 WDR19Q8NEZ3 1342 aa8.52□□□□□ -1.05
COL9A1-209ENST00000489861 EVPLQ92817 2033 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 LAMA1P25391 3075 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 TICRRQ7Z2Z1 1910 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 MGEA5O60502 916 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 NR3C2P08235 984 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 SRFP11831 508 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 USH1GQ495M9 461 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 GIMAP6Q6P9H5 292 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 DCLRE1AQ6PJP8 1040 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 CCDC149Q6ZUS6 474 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 GPR149Q86SP6 731 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 DCAF4Q8WV16 495 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 DNAJB3Q8WWF6 145 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 DDX1Q92499 740 aaKnown RBP8.51□□□□□ -1.05
COL9A1-209ENST00000489861 ZFP91Q96JP5 570 aaPredicted RBP8.51□□□□□ -1.05
COL9A1-209ENST00000489861 GPR20Q99678 358 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 FTHL17Q9BXU8 183 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 DACH1Q9UI36 760 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 LRFN2Q9ULH4 789 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 PADI3Q9ULW8 664 aa8.51□□□□□ -1.05
COL9A1-209ENST00000489861 SPINK2P20155 84 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 PDE4AP27815 886 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 SARSP49591 514 aaKnown RBP8.5□□□□□ -1.05
COL9A1-209ENST00000489861 STARD6P59095 220 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 ARHGEF16Q5VV41 709 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 CEP85Q6P2H3 762 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 LRRC55Q6ZSA7 311 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 LURAP1LQ8IV03 231 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 SLC22A17Q8WUG5 538 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 ZBTB10Q96DT7 871 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 GPATCH3Q96I76 525 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 BOLA2Q9H3K6 86 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 ZNF287Q9HBT7 754 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 PXMP2Q9NR77 195 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 DZANK1Q9NVP4 752 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 WASF3Q9UPY6 502 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 EXOC6BQ9Y2D4 811 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 PCDHB7Q9Y5E2 793 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 FREM2Q5SZK8 3169 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 NRCAMQ92823 1304 aa8.5□□□□□ -1.05
COL9A1-209ENST00000489861 CACNA1EQ15878 2313 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 LRP3O75074 770 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 RETP07949 1114 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 FGFR1P11362 822 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 LAG3P18627 525 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 NOVP48745 357 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 MRPS6P82932 125 aaKnown RBP8.49□□□□□ -1.05
COL9A1-209ENST00000489861 SMC1AQ14683 1233 aaKnown RBP8.49□□□□□ -1.05
COL9A1-209ENST00000489861 PTPN14Q15678 1187 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 CCDC6Q16204 474 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 CSRP2Q16527 193 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 LETM2Q2VYF4 491 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 MARCH8Q5T0T0 291 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 IL31Q6EBC2 164 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 LAIR1Q6GTX8 287 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 TAF2Q6P1X5 1199 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 KCNT2Q6UVM3 1135 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 ST13P5Q8NFI4 369 aaPredicted RBP8.49□□□□□ -1.05
COL9A1-209ENST00000489861 IL31RAQ8NI17 732 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 RHPN1Q8TCX5 695 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 AUTS2Q8WXX7 1259 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 GATA6Q92908 595 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 OSBP2Q969R2 916 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 USP26Q9BXU7 913 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 BCO2Q9BYV7 579 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 MLXIPQ9HAP2 919 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 IGSF5Q9NSI5 407 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 APC2O95996 2303 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 CELSR3Q9NYQ7 3312 aa8.49□□□□□ -1.05
COL9A1-209ENST00000489861 PCNX2A6NKB5 2137 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 KANSL1LA0AUZ9 987 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 KCNK5O95279 499 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 CXCL14O95715 111 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 TOP3BO95985 862 aaKnown RBP8.48□□□□□ -1.05
COL9A1-209ENST00000489861 MYCLP12524 364 aaPredicted RBP8.48□□□□□ -1.05
COL9A1-209ENST00000489861 TDO2P48775 406 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 TMEM266Q2M3C6 531 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 PRR23BQ6ZRT6 265 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 CABP7Q86V35 215 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 MYADMQ96S97 322 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 DDX23Q9BUQ8 820 aaKnown RBP8.48□□□□□ -1.05
COL9A1-209ENST00000489861 CPVLQ9H3G5 476 aa8.48□□□□□ -1.05
COL9A1-209ENST00000489861 SLC2A4RGQ9NR83 387 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms