RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 ZNF862O60290 1169 aa15.04■□□□□ -0
CCL28-202ENST00000489442 DKC1O60832 514 aaKnown RBP eCLIP15.04■□□□□ -0
CCL28-202ENST00000489442 GHRP10912 638 aa15.04■□□□□ -0
CCL28-202ENST00000489442 TMOD1P28289 359 aa15.04■□□□□ -0
CCL28-202ENST00000489442 MCM7P33993 719 aa15.04■□□□□ -0
CCL28-202ENST00000489442 WDR5P61964 334 aaKnown RBP15.04■□□□□ -0
CCL28-202ENST00000489442 PLEKHG4Q58EX7 1191 aa15.04■□□□□ -0
CCL28-202ENST00000489442 MCTP1Q6DN14 999 aa15.04■□□□□ -0
CCL28-202ENST00000489442 NCAPH2Q6IBW4 605 aa15.04■□□□□ -0
CCL28-202ENST00000489442 NOSTRINQ8IVI9 506 aa15.04■□□□□ -0
CCL28-202ENST00000489442 BANK1Q8NDB2 785 aa15.04■□□□□ -0
CCL28-202ENST00000489442 MTMR10Q9NXD2 777 aa15.04■□□□□ -0
CCL28-202ENST00000489442 SEPT9Q9UHD8 586 aaPredicted RBP15.04■□□□□ -0
CCL28-202ENST00000489442 NOL7Q9UMY1 257 aaKnown RBP15.04■□□□□ -0
CCL28-202ENST00000489442 GINS2Q9Y248 185 aa15.04■□□□□ -0
CCL28-202ENST00000489442 PCDHA11Q9Y5I1 949 aa15.04■□□□□ -0
CCL28-202ENST00000489442 ZBTB42B2RXF5 422 aa15.03■□□□□ -0
CCL28-202ENST00000489442 H3BQV1 296 aa15.03■□□□□ -0
CCL28-202ENST00000489442 EML1O00423 815 aa15.03■□□□□ -0
CCL28-202ENST00000489442 AMHP03971 560 aa15.03■□□□□ -0
CCL28-202ENST00000489442 GJB2P29033 226 aa15.03■□□□□ -0
CCL28-202ENST00000489442 TXKP42681 527 aa15.03■□□□□ -0
CCL28-202ENST00000489442 QARSP47897 775 aaKnown RBP15.03■□□□□ -0
CCL28-202ENST00000489442 PSMC5P62195 406 aa15.03■□□□□ -0
CCL28-202ENST00000489442 XKR3Q5GH77 459 aa15.03■□□□□ -0
CCL28-202ENST00000489442 B3GNT9Q6UX72 402 aa15.03■□□□□ -0
CCL28-202ENST00000489442 HERC6Q8IVU3 1022 aa15.03■□□□□ -0
CCL28-202ENST00000489442 APBB2Q92870 758 aa15.03■□□□□ -0
CCL28-202ENST00000489442 CELF4Q9BZC1 486 aaKnown RBP15.03■□□□□ -0
CCL28-202ENST00000489442 NKX2-4Q9H2Z4 354 aa15.03■□□□□ -0
CCL28-202ENST00000489442 ZNF576Q9H609 170 aa15.03■□□□□ -0
CCL28-202ENST00000489442 TTC12Q9H892 705 aaPredicted RBP15.03■□□□□ -0
CCL28-202ENST00000489442 SUGCTQ9HAC7 445 aa15.03■□□□□ -0
CCL28-202ENST00000489442 VAV3Q9UKW4 847 aa15.03■□□□□ -0
CCL28-202ENST00000489442 TRPV2Q9Y5S1 764 aa15.03■□□□□ -0
CCL28-202ENST00000489442 SIP14410 1827 aa15.03■□□□□ -0
CCL28-202ENST00000489442 CHD9Q3L8U1 2897 aa15.02■□□□□ -0
CCL28-202ENST00000489442 TLL1O43897 1013 aa15.02■□□□□ -0
CCL28-202ENST00000489442 C22orf31O95567 290 aa15.02■□□□□ -0
CCL28-202ENST00000489442 P4HBP07237 508 aaKnown RBP15.02■□□□□ -0
CCL28-202ENST00000489442 DEFB103AP81534 67 aa15.02■□□□□ -0
CCL28-202ENST00000489442 MGAT3Q09327 533 aa15.02■□□□□ -0
CCL28-202ENST00000489442 TBC1D8BQ0IIM8 1120 aa15.02■□□□□ -0
CCL28-202ENST00000489442 EPHA7Q15375 998 aa15.02■□□□□ -0
CCL28-202ENST00000489442 ZNF174Q15697 407 aa15.02■□□□□ -0
CCL28-202ENST00000489442 TCTN1Q2MV58 587 aa15.02■□□□□ -0
CCL28-202ENST00000489442 MTERF2Q49AM1 385 aa15.02■□□□□ -0
CCL28-202ENST00000489442 FBXO47Q5MNV8 452 aa15.02■□□□□ -0
CCL28-202ENST00000489442 EFCAB12Q6NXP0 572 aa15.02■□□□□ -0
CCL28-202ENST00000489442 KIAA0319LQ8IZA0 1049 aa15.02■□□□□ -0
CCL28-202ENST00000489442 MYOCDQ8IZQ8 938 aa15.02■□□□□ -0
CCL28-202ENST00000489442 USP38Q8NB14 1042 aa15.02■□□□□ -0
CCL28-202ENST00000489442 MAP7D2Q96T17 732 aa15.02■□□□□ -0
CCL28-202ENST00000489442 OSBPL7Q9BZF2 842 aa15.02■□□□□ -0
CCL28-202ENST00000489442 TTYH1Q9H313 450 aaPredicted RBP15.02■□□□□ -0
CCL28-202ENST00000489442 AKT3Q9Y243 479 aa15.02■□□□□ -0
CCL28-202ENST00000489442 PTPRSQ13332 1948 aa15.02□□□□□ -0.01
CCL28-202ENST00000489442 MYOGP15173 224 aa15.01□□□□□ -0.01
CCL28-202ENST00000489442 LPIN1Q14693 890 aa15.01□□□□□ -0.01
CCL28-202ENST00000489442 TTC38Q5R3I4 469 aa15.01□□□□□ -0.01
CCL28-202ENST00000489442 PPP2R2DQ66LE6 453 aa15.01□□□□□ -0.01
CCL28-202ENST00000489442 FAM117BQ6P1L5 589 aa15.01□□□□□ -0.01
CCL28-202ENST00000489442 TSHZ1Q6ZSZ6 1077 aa15.01□□□□□ -0.01
CCL28-202ENST00000489442 YBX2Q9Y2T7 364 aaKnown RBP15.01□□□□□ -0.01
CCL28-202ENST00000489442 RBAK-RBAKDNI3L0D1 243 aa15□□□□□ -0.01
CCL28-202ENST00000489442 WNT7AO00755 349 aa15□□□□□ -0.01
CCL28-202ENST00000489442 VTNP04004 478 aa15□□□□□ -0.01
CCL28-202ENST00000489442 U2AF2P26368 475 aaKnown RBP eCLIP15□□□□□ -0.01
CCL28-202ENST00000489442 CD52P31358 61 aa15□□□□□ -0.01
CCL28-202ENST00000489442 TRAPPC10P48553 1259 aa15□□□□□ -0.01
CCL28-202ENST00000489442 DNM2P50570 870 aa15□□□□□ -0.01
CCL28-202ENST00000489442 CLCN3P51790 818 aa15□□□□□ -0.01
CCL28-202ENST00000489442 CYP4A11Q02928 519 aa15□□□□□ -0.01
CCL28-202ENST00000489442 PAK2Q13177 524 aa15□□□□□ -0.01
CCL28-202ENST00000489442 ORC2Q13416 577 aaPredicted RBP15□□□□□ -0.01
CCL28-202ENST00000489442 LARP1BQ659C4 914 aaKnown RBP15□□□□□ -0.01
CCL28-202ENST00000489442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15□□□□□ -0.01
CCL28-202ENST00000489442 TMCO2Q7Z6W1 182 aaPredicted RBP15□□□□□ -0.01
CCL28-202ENST00000489442 TPH2Q8IWU9 490 aa15□□□□□ -0.01
CCL28-202ENST00000489442 LRRC71Q8N4P6 559 aa15□□□□□ -0.01
CCL28-202ENST00000489442 DYDC2Q96IM9 177 aa15□□□□□ -0.01
CCL28-202ENST00000489442 SCLT1Q96NL6 688 aa15□□□□□ -0.01
CCL28-202ENST00000489442 PPP1R16BQ96T49 567 aa15□□□□□ -0.01
CCL28-202ENST00000489442 CDX2Q99626 313 aaPredicted RBP15□□□□□ -0.01
CCL28-202ENST00000489442 SH2D3AQ9BRG2 576 aa15□□□□□ -0.01
CCL28-202ENST00000489442 LXNQ9BS40 222 aa15□□□□□ -0.01
CCL28-202ENST00000489442 NIFKQ9BYG3 293 aaKnown RBP15□□□□□ -0.01
CCL28-202ENST00000489442 RGL1Q9NZL6 768 aa15□□□□□ -0.01
CCL28-202ENST00000489442 SQORQ9Y6N5 450 aa15□□□□□ -0.01
CCL28-202ENST00000489442 TMEM150BA6NC51 233 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 UPP2O95045 317 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 CA3P07451 260 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 SPIRE1Q08AE8 756 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 NFX1Q12986 1120 aaKnown RBP14.99□□□□□ -0.01
CCL28-202ENST00000489442 CTTNQ14247 550 aaKnown RBP14.99□□□□□ -0.01
CCL28-202ENST00000489442 KIZQ2M2Z5 673 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 ODR4Q5SWX8 454 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 OTUD6AQ7L8S5 288 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 GUCD1Q96NT3 240 aa14.99□□□□□ -0.01
CCL28-202ENST00000489442 MTMR9Q96QG7 549 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms