RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 FAM26FQ5R3K3 315 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 ADSSL1Q8N142 457 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 PPTC7Q8NI37 304 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 HPS3Q969F9 1004 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 CEP170P1Q96L14 293 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 ZHX3Q9H4I2 956 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 SLC39A2Q9NP94 309 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 NRBP1Q9UHY1 535 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 ODF2LQ9ULJ1 636 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 COL4A3BPQ9Y5P4 624 aa23.17■■□□□ 1.3
SND1-214ENST00000489417 RSPH10B2B2RC85 870 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 USO1O60763 962 aaKnown RBP23.16■■□□□ 1.3
SND1-214ENST00000489417 FAM13AO94988 1023 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 RSPH10BP0C881 870 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 GAP43P17677 238 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 HOXD10P28358 340 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 PPP1R2P41236 205 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 MFSD14CQ5VZR4 134 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 KLHL10Q6JEL2 608 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 PLPPR4Q7Z2D5 763 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 TRMT44Q8IYL2 757 aaKnown RBP23.16■■□□□ 1.3
SND1-214ENST00000489417 KIAA0895Q8NCT3 520 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 OR6J1Q8NGC5 347 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 AFG1LQ8WV93 481 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 GLG1Q92896 1179 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 SH2D3AQ9BRG2 576 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 TIPINQ9BVW5 301 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 ADCY6O43306 1168 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 SFR1Q86XK3 245 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 ENOX1Q8TC92 643 aaKnown RBP23.16■■□□□ 1.3
SND1-214ENST00000489417 TRIB2Q92519 343 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 FAM167AQ96KS9 214 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 CYP26B1Q9NR63 512 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 NRBP2Q9NSY0 501 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 CTNND2Q9UQB3 1225 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 MAPK8IP1Q9UQF2 711 aa23.16■■□□□ 1.3
SND1-214ENST00000489417 HIP1RO75146 1068 aa23.15■■□□□ 1.3
SND1-214ENST00000489417 NCAPHQ15003 741 aa23.15■■□□□ 1.3
SND1-214ENST00000489417 TRIM50Q86XT4 487 aa23.15■■□□□ 1.3
SND1-214ENST00000489417 ERO1AQ96HE7 468 aa23.15■■□□□ 1.3
SND1-214ENST00000489417 NIFKQ9BYG3 293 aaKnown RBP23.15■■□□□ 1.3
SND1-214ENST00000489417 SMARCAD1Q9H4L7 1026 aa23.15■■□□□ 1.3
SND1-214ENST00000489417 SRRDQ9UH36 339 aa23.15■■□□□ 1.3
SND1-214ENST00000489417 FAM184BQ9ULE4 1060 aa23.15■■□□□ 1.3
SND1-214ENST00000489417 GNEQ9Y223 722 aaKnown RBP23.15■■□□□ 1.3
SND1-214ENST00000489417 PCDHA2Q9Y5H9 948 aa23.15■■□□□ 1.3
SND1-214ENST00000489417 SYNRGQ9UMZ2 1314 aa23.14■■□□□ 1.3
SND1-214ENST00000489417 ARID2Q68CP9 1835 aa23.14■■□□□ 1.3
SND1-214ENST00000489417 PSMA7O14818 248 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 FKTNO75072 461 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 HSPA6P17066 643 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 SLC26A2P50443 739 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 ZNF131P52739 623 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 PAK1Q13153 545 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 MAPK7Q13164 816 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 MTERF2Q49AM1 385 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 NELFBQ8WX92 580 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 DHTKD1Q96HY7 919 aaPredicted RBP23.14■■□□□ 1.29
SND1-214ENST00000489417 PARVGQ9HBI0 331 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 POLD4Q9HCU8 107 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 TBC1D7Q9P0N9 293 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 RWDD2AQ9UIY3 292 aa23.14■■□□□ 1.29
SND1-214ENST00000489417 CASP8AP2Q9UKL3 1982 aa23.13■■□□□ 1.29
SND1-214ENST00000489417 GNRH1P01148 92 aa23.13■■□□□ 1.29
SND1-214ENST00000489417 LGALS2P05162 132 aa23.13■■□□□ 1.29
SND1-214ENST00000489417 STX17P56962 302 aa23.13■■□□□ 1.29
SND1-214ENST00000489417 TPM4P67936 248 aa23.13■■□□□ 1.29
SND1-214ENST00000489417 GUF1Q8N442 669 aaKnown RBP23.13■■□□□ 1.29
SND1-214ENST00000489417 MED15Q96RN5 788 aa23.13■■□□□ 1.29
SND1-214ENST00000489417 SEL1LQ9UBV2 794 aa23.13■■□□□ 1.29
SND1-214ENST00000489417 MYH9P35579 1960 aaKnown RBP23.12■■□□□ 1.29
SND1-214ENST00000489417 SFI1A8K8P3 1242 aa23.12■■□□□ 1.29
SND1-214ENST00000489417 DYNC1LI2O43237 492 aaPredicted RBP23.12■■□□□ 1.29
SND1-214ENST00000489417 DGAT1O75907 488 aa23.12■■□□□ 1.29
SND1-214ENST00000489417 HOXD8P13378 290 aaPredicted RBP23.12■■□□□ 1.29
SND1-214ENST00000489417 CYBAP13498 195 aa23.12■■□□□ 1.29
SND1-214ENST00000489417 MARK3P27448 753 aa23.12■■□□□ 1.29
SND1-214ENST00000489417 MAEAQ7L5Y9 396 aa23.12■■□□□ 1.29
SND1-214ENST00000489417 DAW1Q8N136 415 aa23.12■■□□□ 1.29
SND1-214ENST00000489417 MYCT1Q8N699 235 aa23.12■■□□□ 1.29
SND1-214ENST00000489417 TRPV1Q8NER1 839 aa23.12■■□□□ 1.29
SND1-214ENST00000489417 ATP8B4Q8TF62 1192 aa23.12■■□□□ 1.29
SND1-214ENST00000489417 BBXQ8WY36 941 aaPredicted RBP23.12■■□□□ 1.29
SND1-214ENST00000489417 OLFML3Q9NRN5 406 aa23.12■■□□□ 1.29
SND1-214ENST00000489417 PPME1Q9Y570 386 aa23.12■■□□□ 1.29
SND1-214ENST00000489417 PPFIA4O75335 1185 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 MMP3P08254 477 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 AKR1A1P14550 325 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 ARHGEF6Q15052 776 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 PLCB4Q15147 1175 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 LRRC41Q15345 812 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 TLK2Q86UE8 772 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 MYOCDQ8IZQ8 938 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 GLIS3Q8NEA6 775 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 MCPH1Q8NEM0 835 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 DRC1Q96MC2 740 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 FGFBP2Q9BYJ0 223 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 ATP6V0A4Q9HBG4 840 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 ERAP1Q9NZ08 941 aa23.11■■□□□ 1.29
SND1-214ENST00000489417 Q9Y3F1 56 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms