RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 HEATR3Q7Z4Q2 680 aa12.35□□□□□ -0.43
PTP4A2-206ENST00000489313 SUGP1Q8IWZ8 645 aaKnown RBP12.35□□□□□ -0.43
PTP4A2-206ENST00000489313 VN1R2Q8NFZ6 395 aa12.35□□□□□ -0.43
PTP4A2-206ENST00000489313 PGBD1Q96JS3 809 aa12.35□□□□□ -0.43
PTP4A2-206ENST00000489313 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
PTP4A2-206ENST00000489313 SMIM35A0A1B0GVV1 85 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 TBKBP1A7MCY6 615 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 MAFGO15525 162 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 ARP10275 920 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 STAT5BP51692 787 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 PTPN5P54829 565 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 ITGB3BPQ13352 177 aaPredicted RBP12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 FAM102BQ5T8I3 360 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 MTHFD1LQ6UB35 978 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 PLPPR4Q7Z2D5 763 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 FBXL6Q8N531 539 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 MXRA8Q9BRK3 442 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 SDF4Q9BRK5 362 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 PHF7Q9BWX1 381 aaPredicted RBP12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 NOC2LQ9Y3T9 749 aaKnown RBP12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 PCDHB7Q9Y5E2 793 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 PCDHB12Q9Y5F1 795 aa12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 RIF1Q5UIP0 2472 aaKnown RBP12.34□□□□□ -0.43
PTP4A2-206ENST00000489313 KDM3AQ9Y4C1 1321 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 KLRC1P26715 233 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 MCM5P33992 734 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 ERVFC1P60507 584 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 TCF15Q12870 199 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 TMTC3Q6ZXV5 915 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 NME8Q8N427 588 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 TMEM40Q8WWA1 233 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 TNPO1Q92973 898 aaKnown RBP12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 ADAM2Q99965 735 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 LRRC2Q9BYS8 371 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 ERVK-5Q9HDB9 667 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 TLR9Q9NR96 1032 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 ZNF292O60281 2723 aa12.33□□□□□ -0.44
PTP4A2-206ENST00000489313 DMXL1Q9Y485 3027 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 PTPRZ1P23471 2315 aaPredicted RBP12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 NFASCO94856 1347 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 DENND3A2RUS2 1198 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 DDX39AO00148 427 aaKnown RBP12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 RPS6KA5O75582 802 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 FGF18O76093 207 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 VCPP55072 806 aaKnown RBP12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 UBE3AQ05086 875 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 APOBRQ0VD83 1088 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 DUSP6Q16828 381 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 WWC2Q6AWC2 1192 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 THNSL1Q8IYQ7 743 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 KIAA0319LQ8IZA0 1049 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 TMTC2Q8N394 836 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 ATP8B4Q8TF62 1192 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 SUSD6Q92537 303 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 TMEM87BQ96K49 555 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 PPP1R16BQ96T49 567 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 MTA3Q9BTC8 594 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 APOL5Q9BWW9 433 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 AGO4Q9HCK5 861 aaKnown RBP12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 TYW1Q9NV66 732 aaKnown RBP12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 FAM86C1Q9NVL1 165 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 TMEM260Q9NX78 707 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 MYH9P35579 1960 aaKnown RBP12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 MYO10Q9HD67 2058 aa12.32□□□□□ -0.44
PTP4A2-206ENST00000489313 BACH1O14867 736 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 CCNE2O96020 404 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 CALM1P0DP23 149 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 CALM2P0DP24 149 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 CALM3P0DP25 149 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 FGFR1P11362 822 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 SP100P23497 879 aaPredicted RBP12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 SIGLEC14Q08ET2 396 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 PKN1Q16512 942 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 CEP55Q53EZ4 464 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 PLPP4Q5VZY2 271 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 TYW1BQ6NUM6 668 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 MICU3Q86XE3 530 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 SPNS2Q8IVW8 549 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 FANCBQ8NB91 859 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 COLGALT1Q8NBJ5 622 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 NEK1Q96PY6 1258 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 AAASQ9NRG9 546 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 RGS18Q9NS28 235 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 ST3GAL5Q9UNP4 418 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 SLC12A7Q9Y666 1083 aa12.31□□□□□ -0.44
PTP4A2-206ENST00000489313 C9IYK1 514 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 ATG7O95352 703 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 ATF7P17544 494 aaPredicted RBP12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 LIFRP42702 1097 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 NAPAP54920 295 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 KIZQ2M2Z5 673 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 LLGL2Q6P1M3 1020 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 SLC24A5Q71RS6 500 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 ASIC4Q96FT7 647 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 PRRX2Q99811 253 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 ANO3Q9BYT9 981 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 CWH43Q9H720 699 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 DCHS1Q96JQ0 3298 aa12.3□□□□□ -0.44
PTP4A2-206ENST00000489313 IGKV6D-21A0A0A0MT36 114 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms