RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PRAMEF25A6NGN4 478 aa4.64□□□□□ -1.67
CCDC93-209ENST00000488908 COL10A1Q03692 680 aa4.64□□□□□ -1.67
CCDC93-209ENST00000488908 HGFACQ04756 655 aa4.64□□□□□ -1.67
CCDC93-209ENST00000488908 PAK1Q13153 545 aa4.64□□□□□ -1.67
CCDC93-209ENST00000488908 TMEM200BQ69YZ2 307 aa4.64□□□□□ -1.67
CCDC93-209ENST00000488908 LAIR1Q6GTX8 287 aa4.64□□□□□ -1.67
CCDC93-209ENST00000488908 Q6ZPA2 131 aa4.64□□□□□ -1.67
CCDC93-209ENST00000488908 ZNF662Q6ZS27 426 aa4.64□□□□□ -1.67
CCDC93-209ENST00000488908 OSBP2Q969R2 916 aa4.64□□□□□ -1.67
CCDC93-209ENST00000488908 ARHGEF4Q9NR80 690 aa4.64□□□□□ -1.67
CCDC93-209ENST00000488908 HECAQ9UBI9 543 aaPredicted RBP4.64□□□□□ -1.67
CCDC93-209ENST00000488908 R3HCC1Q9Y3T6 440 aaKnown RBP4.64□□□□□ -1.67
CCDC93-209ENST00000488908 MC4RP32245 332 aa4.63□□□□□ -1.67
CCDC93-209ENST00000488908 ECE1P42892 770 aa4.63□□□□□ -1.67
CCDC93-209ENST00000488908 HERVK_113P62684 666 aa4.63□□□□□ -1.67
CCDC93-209ENST00000488908 CD83Q01151 205 aa4.63□□□□□ -1.67
CCDC93-209ENST00000488908 FSTL1Q12841 308 aa4.63□□□□□ -1.67
CCDC93-209ENST00000488908 RIN1Q13671 783 aa4.63□□□□□ -1.67
CCDC93-209ENST00000488908 KANK2Q63ZY3 851 aa4.63□□□□□ -1.67
CCDC93-209ENST00000488908 RPUSD2Q8IZ73 545 aaKnown RBP4.63□□□□□ -1.67
CCDC93-209ENST00000488908 MRRFQ96E11 262 aaKnown RBP4.63□□□□□ -1.67
CCDC93-209ENST00000488908 OR10A5Q9H207 317 aa4.63□□□□□ -1.67
CCDC93-209ENST00000488908 AGO3Q9H9G7 860 aaKnown RBP4.63□□□□□ -1.67
CCDC93-209ENST00000488908 CATSPERZQ9NTU4 200 aa4.63□□□□□ -1.67
CCDC93-209ENST00000488908 BTBD7Q9P203 1132 aa4.63□□□□□ -1.67
CCDC93-209ENST00000488908 TRAV20A0A0B4J274 112 aa4.62□□□□□ -1.67
CCDC93-209ENST00000488908 MAN2B1O00754 1011 aa4.62□□□□□ -1.67
CCDC93-209ENST00000488908 WNT9AO14904 365 aa4.62□□□□□ -1.67
CCDC93-209ENST00000488908 FBLP22087 321 aaKnown RBP4.62□□□□□ -1.67
CCDC93-209ENST00000488908 PTGS2P35354 604 aa4.62□□□□□ -1.67
CCDC93-209ENST00000488908 ZC3H6P61129 1189 aaKnown RBP4.62□□□□□ -1.67
CCDC93-209ENST00000488908 MOGSQ13724 837 aa4.62□□□□□ -1.67
CCDC93-209ENST00000488908 CNGB1Q14028 1251 aaPredicted RBP4.62□□□□□ -1.67
CCDC93-209ENST00000488908 GRAMD4Q6IC98 578 aa4.62□□□□□ -1.67
CCDC93-209ENST00000488908 PTRH1Q86Y79 214 aaKnown RBP4.62□□□□□ -1.67
CCDC93-209ENST00000488908 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.62□□□□□ -1.673e-7■□□□□ 10.5
CCDC93-209ENST00000488908 ZNF408Q9H9D4 720 aa4.62□□□□□ -1.67
CCDC93-209ENST00000488908 ST7Q9NRC1 585 aa4.62□□□□□ -1.67
CCDC93-209ENST00000488908 SH3BP1Q9Y3L3 701 aa4.62□□□□□ -1.67
CCDC93-209ENST00000488908 ASXL2Q76L83 1435 aa4.62□□□□□ -1.67
CCDC93-209ENST00000488908 A0A1W2PRX2 142 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 AQP7O14520 342 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 C4BPAP04003 597 aaKnown RBP4.61□□□□□ -1.67
CCDC93-209ENST00000488908 AMY2AP04746 511 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 KRT15P19012 456 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 AMY2BP19961 511 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 ADRA1BP35368 520 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 STAT5BP51692 787 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 ATXN1P54253 815 aaKnown RBP4.61□□□□□ -1.67
CCDC93-209ENST00000488908 MFAP1P55081 439 aaKnown RBP4.61□□□□□ -1.67
CCDC93-209ENST00000488908 SLC25A3Q00325 362 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 CCDC142Q17RM4 750 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 MTDHQ86UE4 582 aaKnown RBP4.61□□□□□ -1.67
CCDC93-209ENST00000488908 OSTM1Q86WC4 334 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 LRRC47Q8N1G4 583 aaKnown RBP4.61□□□□□ -1.67
CCDC93-209ENST00000488908 RABGGTAQ92696 567 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 FBXW5Q969U6 566 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 MIEF2Q96C03 454 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 AMNQ9BXJ7 453 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 NRDE2Q9H7Z3 1164 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 UCKL1Q9NWZ5 548 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 GPRC5BQ9NZH0 403 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 TRAF6Q9Y4K3 522 aa4.61□□□□□ -1.67
CCDC93-209ENST00000488908 GSTA4O15217 222 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 CLASP2O75122 1294 aaKnown RBP4.6□□□□□ -1.67
CCDC93-209ENST00000488908 RPS6KA4O75676 772 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 RHOBTB3O94955 611 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 MPIG6BO95866 241 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 GCP02774 474 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 MAN2A2P49641 1150 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 ST5P78524 1137 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 GNL2Q13823 731 aaKnown RBP4.6□□□□□ -1.67
CCDC93-209ENST00000488908 CRY1Q16526 586 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 DDR2Q16832 855 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 LRSAM1Q6UWE0 723 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 LPPQ93052 612 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 NAF1Q96HR8 494 aaKnown RBP4.6□□□□□ -1.67
CCDC93-209ENST00000488908 VWA7Q9Y334 891 aa4.6□□□□□ -1.67
CCDC93-209ENST00000488908 TRAF5O00463 557 aa4.59□□□□□ -1.67
CCDC93-209ENST00000488908 PYGMP11217 842 aa4.59□□□□□ -1.67
CCDC93-209ENST00000488908 IL12RB1P42701 662 aa4.59□□□□□ -1.67
CCDC93-209ENST00000488908 SCNN1GP51170 649 aa4.59□□□□□ -1.67
CCDC93-209ENST00000488908 JAM2P57087 298 aa4.59□□□□□ -1.67
CCDC93-209ENST00000488908 MRPS21P82921 87 aaKnown RBP4.59□□□□□ -1.67
CCDC93-209ENST00000488908 CSRP2Q16527 193 aa4.59□□□□□ -1.67
CCDC93-209ENST00000488908 LRCH2Q5VUJ6 765 aa4.59□□□□□ -1.67
CCDC93-209ENST00000488908 YOD1Q5VVQ6 348 aaPredicted RBP4.59□□□□□ -1.67
CCDC93-209ENST00000488908 Q6ZRM9 215 aa4.59□□□□□ -1.67
CCDC93-209ENST00000488908 C16orf59Q7L2K0 433 aa4.59□□□□□ -1.67
CCDC93-209ENST00000488908 MAMDC2Q7Z304 686 aaPredicted RBP4.59□□□□□ -1.67
CCDC93-209ENST00000488908 GSPT2Q8IYD1 628 aaKnown RBP4.59□□□□□ -1.67
CCDC93-209ENST00000488908 CELF2-AS1Q8N7Q2 184 aa4.59□□□□□ -1.67
CCDC93-209ENST00000488908 ST13P5Q8NFI4 369 aaPredicted RBP4.59□□□□□ -1.67
CCDC93-209ENST00000488908 HAS1Q92839 578 aa4.59□□□□□ -1.67
CCDC93-209ENST00000488908 NUDT3O95989 172 aa4.58□□□□□ -1.68
CCDC93-209ENST00000488908 NAT1P18440 290 aa4.58□□□□□ -1.68
CCDC93-209ENST00000488908 MAP3K12Q12852 859 aa4.58□□□□□ -1.68
CCDC93-209ENST00000488908 TOB2Q14106 344 aaPredicted RBP4.58□□□□□ -1.68
CCDC93-209ENST00000488908 SAFB2Q14151 953 aaKnown RBP eCLIP4.58□□□□□ -1.68
CCDC93-209ENST00000488908 FAM47CQ5HY64 1035 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms