RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 CPA1P15085 419 aa20.93■□□□□ 0.94
HDAC6-231ENST00000488905 DLX2Q07687 328 aaPredicted RBP20.93■□□□□ 0.94
HDAC6-231ENST00000488905 APOBRQ0VD83 1088 aa20.93■□□□□ 0.94
HDAC6-231ENST00000488905 CAMK1Q14012 370 aa20.93■□□□□ 0.94
HDAC6-231ENST00000488905 NAALADL2Q58DX5 795 aa20.93■□□□□ 0.94
HDAC6-231ENST00000488905 MIS18BP1Q6P0N0 1132 aa20.93■□□□□ 0.94
HDAC6-231ENST00000488905 PDXDC2PQ6P474 469 aa20.93■□□□□ 0.94
HDAC6-231ENST00000488905 REXO1Q8N1G1 1221 aaKnown RBP20.93■□□□□ 0.94
HDAC6-231ENST00000488905 CCDC12Q8WUD4 166 aaPredicted RBP20.93■□□□□ 0.94
HDAC6-231ENST00000488905 ZMYND12Q9H0C1 365 aa20.93■□□□□ 0.94
HDAC6-231ENST00000488905 ERVK-5Q9HDB9 667 aa20.93■□□□□ 0.94
HDAC6-231ENST00000488905 GINS2Q9Y248 185 aa20.93■□□□□ 0.94
HDAC6-231ENST00000488905 ZBTB42B2RXF5 422 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 TBX10O75333 385 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 ITGB1P05556 798 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 ALADP13716 330 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 GTF2F1P35269 517 aaKnown RBP eCLIP20.92■□□□□ 0.94
HDAC6-231ENST00000488905 SARSP49591 514 aaKnown RBP20.92■□□□□ 0.94
HDAC6-231ENST00000488905 GATMP50440 423 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 NFX1Q12986 1120 aaKnown RBP20.92■□□□□ 0.94
HDAC6-231ENST00000488905 CLUL1Q15846 466 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 ZNF484Q5JVG2 852 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 Q6ZUG5 572 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 ADHFE1Q8IWW8 467 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 KIAA0319LQ8IZA0 1049 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 ZNF577Q9BSK1 485 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 LRFN2Q9ULH4 789 aa20.92■□□□□ 0.94
HDAC6-231ENST00000488905 PRR33A8MZF0 331 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 ADAMTS3O15072 1205 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 MGEA5O60502 916 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 RPS6KA5O75582 802 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 ATP4AP20648 1035 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 DNAJB1P25685 340 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 MCTP2Q6DN12 878 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 ZNF746Q6NUN9 644 aaPredicted RBP20.91■□□□□ 0.94
HDAC6-231ENST00000488905 SWSAP1Q6NVH7 229 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 FAM43BQ6ZT52 329 aaPredicted RBP20.91■□□□□ 0.94
HDAC6-231ENST00000488905 KLHL23Q8NBE8 558 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 TMEM40Q8WWA1 233 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 KCNB2Q92953 911 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 BRF1Q92994 677 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 PPP2R3CQ969Q6 453 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 JAKMIP1Q96N16 626 aaKnown RBP20.91■□□□□ 0.94
HDAC6-231ENST00000488905 UIMC1Q96RL1 719 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 IGFLR1Q9H665 355 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 C6orf50Q9HD87 102 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 TBC1D22BQ9NU19 505 aa20.91■□□□□ 0.94
HDAC6-231ENST00000488905 NOC2LQ9Y3T9 749 aaKnown RBP20.91■□□□□ 0.94
HDAC6-231ENST00000488905 C19orf67A6NJJ6 358 aa20.9■□□□□ 0.94
HDAC6-231ENST00000488905 LINC01565O15544 149 aa20.9■□□□□ 0.94
HDAC6-231ENST00000488905 DCXO43602 365 aa20.9■□□□□ 0.94
HDAC6-231ENST00000488905 C22orf31O95567 290 aa20.9■□□□□ 0.94
HDAC6-231ENST00000488905 IBSPP21815 317 aaPredicted RBP20.9■□□□□ 0.94
HDAC6-231ENST00000488905 SMAD4Q13485 552 aaKnown RBP20.9■□□□□ 0.94
HDAC6-231ENST00000488905 SMAD2Q15796 467 aaKnown RBP20.9■□□□□ 0.94
HDAC6-231ENST00000488905 PKN1Q16512 942 aa20.9■□□□□ 0.94
HDAC6-231ENST00000488905 CKAP2LQ8IYA6 745 aa20.9■□□□□ 0.94
HDAC6-231ENST00000488905 SMAP1Q8IYB5 467 aaPredicted RBP20.9■□□□□ 0.94
HDAC6-231ENST00000488905 SPPL3Q8TCT6 385 aa20.9■□□□□ 0.94
HDAC6-231ENST00000488905 CDHR5Q9HBB8 845 aa20.9■□□□□ 0.94
HDAC6-231ENST00000488905 TCEAL9Q9UHQ7 104 aa20.9■□□□□ 0.94
HDAC6-231ENST00000488905 MAFBQ9Y5Q3 323 aaPredicted RBP20.9■□□□□ 0.94
HDAC6-231ENST00000488905 DENND3A2RUS2 1198 aa20.89■□□□□ 0.93
HDAC6-231ENST00000488905 MBTPS2O43462 519 aa20.89■□□□□ 0.93
HDAC6-231ENST00000488905 ODR4Q5SWX8 454 aa20.89■□□□□ 0.93
HDAC6-231ENST00000488905 BLOC1S2Q6QNY1 142 aa20.89■□□□□ 0.93
HDAC6-231ENST00000488905 ADGRD2Q7Z7M1 963 aa20.89■□□□□ 0.93
HDAC6-231ENST00000488905 POF1BQ8WVV4 589 aa20.89■□□□□ 0.93
HDAC6-231ENST00000488905 BBXQ8WY36 941 aaPredicted RBP20.89■□□□□ 0.93
HDAC6-231ENST00000488905 PPP1R16BQ96T49 567 aa20.89■□□□□ 0.93
HDAC6-231ENST00000488905 OSMRQ99650 979 aa20.89■□□□□ 0.93
HDAC6-231ENST00000488905 C1orf112Q9NSG2 853 aa20.89■□□□□ 0.93
HDAC6-231ENST00000488905 PCDHB7Q9Y5E2 793 aa20.89■□□□□ 0.93
HDAC6-231ENST00000488905 ZNF318Q5VUA4 2279 aa20.89■□□□□ 0.93
HDAC6-231ENST00000488905 PRPF3O43395 683 aaKnown RBP20.88■□□□□ 0.93
HDAC6-231ENST00000488905 GNA11P29992 359 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 HSPA4P34932 840 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 IRS1P35568 1242 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 NDUFV1P49821 464 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 KIZQ2M2Z5 673 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 FAM228AQ86W67 206 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 RASGRP4Q8TDF6 673 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 PHKBQ93100 1093 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 POP1Q99575 1024 aaKnown RBP20.88■□□□□ 0.93
HDAC6-231ENST00000488905 ADAM2Q99965 735 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 RGS18Q9NS28 235 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 RNF216Q9NWF9 866 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-231ENST00000488905 CD207Q9UJ71 328 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 ST3GAL5Q9UNP4 418 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 SNX14Q9Y5W7 946 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 PIEZO1Q92508 2521 aa20.88■□□□□ 0.93
HDAC6-231ENST00000488905 GPR182O15218 404 aa20.87■□□□□ 0.93
HDAC6-231ENST00000488905 PSAPP07602 524 aa20.87■□□□□ 0.93
HDAC6-231ENST00000488905 ADAM15Q13444 863 aa20.87■□□□□ 0.93
HDAC6-231ENST00000488905 PRR16Q569H4 304 aa20.87■□□□□ 0.93
HDAC6-231ENST00000488905 SLC24A5Q71RS6 500 aa20.87■□□□□ 0.93
HDAC6-231ENST00000488905 FBXL16Q8N461 479 aa20.87■□□□□ 0.93
HDAC6-231ENST00000488905 CCDC148Q8NFR7 591 aa20.87■□□□□ 0.93
HDAC6-231ENST00000488905 BICD2Q8TD16 824 aa20.87■□□□□ 0.93
HDAC6-231ENST00000488905 LENG9Q96B70 501 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms