RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, human

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD46-215	ENST00000488596	CARD11	Q9BXL7	1154 aa		4.67	□□□□□ -1.66
CD46-215	ENST00000488596	TRIM39	Q9HCM9	518 aa		4.67	□□□□□ -1.66
CD46-215	ENST00000488596	TCRBV5S4A2T	A0A5A2	114 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	AQP7	O14520	342 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	NARS	O43776	548 aa	Known RBP	4.66	□□□□□ -1.66
CD46-215	ENST00000488596	EFCAB14	O75071	495 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	DNAJC8	O75937	253 aa	Predicted RBP	4.66	□□□□□ -1.66
CD46-215	ENST00000488596	SOD2	P04179	222 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	SRGAP2C	P0DJJ0	459 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	POLD1	P28340	1107 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	MASP1	P48740	699 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	RAC3	P60763	192 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	GPR85	P60893	370 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	TOP3A	Q13472	1001 aa	Predicted RBP	4.66	□□□□□ -1.66
CD46-215	ENST00000488596	ZNF460	Q14592	562 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.66	□□□□□ -1.66
CD46-215	ENST00000488596	FILIP1	Q7Z7B0	1213 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	MTDH	Q86UE4	582 aa	Known RBP	4.66	□□□□□ -1.66
CD46-215	ENST00000488596	CD244	Q9BZW8	370 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	IPPK	Q9H8X2	491 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	NUB1	Q9Y5A7	615 aa		4.66	□□□□□ -1.66
CD46-215	ENST00000488596	TNPO3	Q9Y5L0	923 aa	Known RBP	4.66	□□□□□ -1.66
CD46-215	ENST00000488596	TCRBV16S1A1N1	A0A5B0	115 aa		4.65	□□□□□ -1.67
CD46-215	ENST00000488596	KCNQ2	O43526	872 aa		4.65	□□□□□ -1.67
CD46-215	ENST00000488596	OPA1	O60313	960 aa		4.65	□□□□□ -1.67
CD46-215	ENST00000488596	RAD17	O75943	681 aa		4.65	□□□□□ -1.67
CD46-215	ENST00000488596	MYCLP1	P12525	358 aa	Predicted RBP	4.65	□□□□□ -1.67
CD46-215	ENST00000488596	CR2	P20023	1033 aa		4.65	□□□□□ -1.67
CD46-215	ENST00000488596	ACO1	P21399	889 aa	Known RBP	4.65	□□□□□ -1.67
CD46-215	ENST00000488596	CANX	P27824	592 aa	Known RBP	4.65	□□□□□ -1.67
CD46-215	ENST00000488596	RRAD	P55042	308 aa		4.65	□□□□□ -1.67
CD46-215	ENST00000488596	TGFB2	P61812	414 aa		4.65	□□□□□ -1.67
CD46-215	ENST00000488596	DBP	Q10586	325 aa	Predicted RBP	4.65	□□□□□ -1.67
CD46-215	ENST00000488596	DPYSL5	Q9BPU6	564 aa		4.65	□□□□□ -1.67
CD46-215	ENST00000488596	ZFYVE21	Q9BQ24	234 aa		4.65	□□□□□ -1.67
CD46-215	ENST00000488596	IFT57	Q9NWB7	429 aa		4.65	□□□□□ -1.67
CD46-215	ENST00000488596	OAZ3	Q9UMX2	235 aa		4.65	□□□□□ -1.67
CD46-215	ENST00000488596		A0A087X0B3	334 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.64	□□□□□ -1.67
CD46-215	ENST00000488596	MATN2	O00339	956 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	ZNF202	O95125	648 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	KCNA6	P17658	529 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	PTH1R	Q03431	593 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	DUSP8	Q13202	625 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	TBR1	Q16650	682 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	ZNF568	Q3ZCX4	644 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	TM4SF20	Q53R12	229 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	ABHD17C	Q6PCB6	329 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	LRRTM3	Q86VH5	581 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	UBR7	Q8N806	425 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	PCDH19	Q8TAB3	1148 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
CD46-215	ENST00000488596	MFSD3	Q96ES6	412 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	CSRNP2	Q9H175	543 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.64	□□□□□ -1.67
CD46-215	ENST00000488596	PLAA	Q9Y263	795 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	COQ6	Q9Y2Z9	468 aa		4.64	□□□□□ -1.67
CD46-215	ENST00000488596	FAM83G	A6ND36	823 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	FAM90A27P	A6NNH2	459 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	FAM47E-STBD1	D6RA91	191 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	CDC14B	O60729	498 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	CUTA	O60888	179 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	JMJD7	P0C870	316 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	TGM1	P22735	817 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	DNM2	P50570	870 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	NEK4	P51957	841 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	ABHD18	Q0P651	414 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	PAK1	Q13153	545 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
CD46-215	ENST00000488596	LSM12	Q3MHD2	195 aa	Known RBP	4.63	□□□□□ -1.67
CD46-215	ENST00000488596	RNF187	Q5TA31	235 aa	Predicted RBP	4.63	□□□□□ -1.67
CD46-215	ENST00000488596	BTBD8	Q5XKL5	378 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	MAMDC4	Q6UXC1	1216 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	C1orf210	Q8IVY1	113 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.63	□□□□□ -1.67
CD46-215	ENST00000488596	IL17D	Q8TAD2	202 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	CHFR	Q96EP1	664 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	OR14A2	Q96R54	314 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	ALG1	Q9BT22	464 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	TARS2	Q9BW92	718 aa	Known RBP	4.63	□□□□□ -1.67
CD46-215	ENST00000488596	SPC25	Q9HBM1	224 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	C11orf21	Q9P2W6	132 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	SLC30A1	Q9Y6M5	507 aa		4.63	□□□□□ -1.67
CD46-215	ENST00000488596	ARVCF	O00192	962 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	PDE8A	O60658	829 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	DNAJC6	O75061	913 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	ASL	P04424	464 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	C1S	P09871	688 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	PYGM	P11217	842 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	PTPN1	P18031	435 aa	Known RBP	4.62	□□□□□ -1.67
CD46-215	ENST00000488596	IGFALS	P35858	605 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	SMN1	Q16637	294 aa	Known RBP	4.62	□□□□□ -1.67
CD46-215	ENST00000488596	TAF7L	Q5H9L4	462 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.62	□□□□□ -1.67
CD46-215	ENST00000488596	DPP8	Q6V1X1	898 aa	Predicted RBP	4.62	□□□□□ -1.67
CD46-215	ENST00000488596	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
CD46-215	ENST00000488596	POLN	Q7Z5Q5	900 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	ZNF575	Q86XF7	245 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	IGSF22	Q8N9C0	903 aa		4.62	□□□□□ -1.67
CD46-215	ENST00000488596	GPATCH3	Q96I76	525 aa		4.62	□□□□□ -1.67

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