RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 FTHL17Q9BXU8 183 aa13□□□□□ -0.33
SNU13-208ENST00000488571 TMX1Q9H3N1 280 aa13□□□□□ -0.33
SNU13-208ENST00000488571 KCNH7Q9NS40 1196 aa13□□□□□ -0.33
SNU13-208ENST00000488571 SLC9A2Q9UBY0 812 aa13□□□□□ -0.33
SNU13-208ENST00000488571 PCDHGC5Q9Y5F6 944 aa13□□□□□ -0.33
SNU13-208ENST00000488571 TRPV2Q9Y5S1 764 aa13□□□□□ -0.33
SNU13-208ENST00000488571 FNDC1Q4ZHG4 1894 aaPredicted RBP12.99□□□□□ -0.33
SNU13-208ENST00000488571 KDM3AQ9Y4C1 1321 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 CCDC69A6NI79 296 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 SPDYE3A6NKU9 549 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 GLP2RO95838 553 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 RPLP2P05387 115 aaKnown RBP12.99□□□□□ -0.33
SNU13-208ENST00000488571 SCG2P13521 617 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 LIFRP42702 1097 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 NDUFV1P49821 464 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 PAN2Q504Q3 1202 aaKnown RBP12.99□□□□□ -0.33
SNU13-208ENST00000488571 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 TMTC2Q8N394 836 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 CCDC82Q8N4S0 544 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 EFHBQ8N7U6 833 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 SMRP1Q8NCR6 262 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 POF1BQ8WVV4 589 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 MXRA8Q9BRK3 442 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 CELF4Q9BZC1 486 aaKnown RBP12.99□□□□□ -0.33
SNU13-208ENST00000488571 PCDHA2Q9Y5H9 948 aa12.99□□□□□ -0.33
SNU13-208ENST00000488571 NFASCO94856 1347 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 SMIM35A0A1B0GVV1 85 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 STAG3L1P0CL83 205 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 ARP10275 920 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 MCM5P33992 734 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 NRIP1P48552 1158 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 ACTR2P61160 394 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 COASYQ13057 564 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 PAK2Q13177 524 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 ITGB3BPQ13352 177 aaPredicted RBP12.98□□□□□ -0.33
SNU13-208ENST00000488571 TMEM266Q2M3C6 531 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 TYW1BQ6NUM6 668 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 MTHFD1LQ6UB35 978 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 TMTC3Q6ZXV5 915 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 PLPPR4Q7Z2D5 763 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 EDAQ92838 391 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 LSG1Q9H089 658 aaKnown RBP12.98□□□□□ -0.33
SNU13-208ENST00000488571 AZI2Q9H6S1 392 aa12.98□□□□□ -0.33
SNU13-208ENST00000488571 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 LOC730098B7Z3J9 87 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 M0QZ92 97 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 SLC27A2O14975 620 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 MGEA5O60502 916 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 ATG7O95352 703 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 CALM1P0DP23 149 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 CALM2P0DP24 149 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 CALM3P0DP25 149 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 STAT5BP51692 787 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 CBX2Q14781 532 aaPredicted RBP12.97□□□□□ -0.33
SNU13-208ENST00000488571 WWC2Q6AWC2 1192 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 HEATR3Q7Z4Q2 680 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 RBM23Q86U06 439 aaKnown RBP12.97□□□□□ -0.33
SNU13-208ENST00000488571 FANCBQ8NB91 859 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 PPP2R3CQ969Q6 453 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 PGBD1Q96JS3 809 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 MFSD14AQ96MC6 490 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 LRRC2Q9BYS8 371 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 CDHR5Q9HBB8 845 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 BARX2Q9UMQ3 279 aaPredicted RBP12.97□□□□□ -0.33
SNU13-208ENST00000488571 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
SNU13-208ENST00000488571 KMT2EQ8IZD2 1858 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 IGKV6D-21A0A0A0MT36 114 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 CCNE2O96020 404 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 NUDT7P0C024 238 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 SARSP49591 514 aaKnown RBP12.96□□□□□ -0.33
SNU13-208ENST00000488571 RBM10P98175 930 aaKnown RBP12.96□□□□□ -0.33
SNU13-208ENST00000488571 KRT76Q01546 638 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 CEP55Q53EZ4 464 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 TRIM67Q6ZTA4 783 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 BMP8AQ7Z5Y6 402 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 SGMS1Q86VZ5 419 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 NME8Q8N427 588 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 PRSS33Q8NF86 280 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 VN1R2Q8NFZ6 395 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 TMEM40Q8WWA1 233 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
SNU13-208ENST00000488571 SDF4Q9BRK5 362 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 AGO4Q9HCK5 861 aaKnown RBP12.96□□□□□ -0.33
SNU13-208ENST00000488571 ERVK-5Q9HDB9 667 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 RIC8AQ9NPQ8 531 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.33
SNU13-208ENST00000488571 HCSTQ9UBK5 93 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 NOC2LQ9Y3T9 749 aaKnown RBP12.96□□□□□ -0.33
SNU13-208ENST00000488571 USP15Q9Y4E8 981 aaPredicted RBP12.96□□□□□ -0.33
SNU13-208ENST00000488571 SLC12A7Q9Y666 1083 aa12.96□□□□□ -0.33
SNU13-208ENST00000488571 EVPLQ92817 2033 aa12.95□□□□□ -0.34
SNU13-208ENST00000488571 ZBTB42B2RXF5 422 aa12.95□□□□□ -0.34
SNU13-208ENST00000488571 MEIS1O00470 390 aa12.95□□□□□ -0.34
SNU13-208ENST00000488571 KLRC1P26715 233 aa12.95□□□□□ -0.34
SNU13-208ENST00000488571 FUT2Q10981 343 aa12.95□□□□□ -0.34
SNU13-208ENST00000488571 NFX1Q12986 1120 aaKnown RBP12.95□□□□□ -0.34
SNU13-208ENST00000488571 NECTIN1Q15223 517 aa12.95□□□□□ -0.34
SNU13-208ENST00000488571 ABHD15Q6UXT9 468 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms