RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 NKX2-4Q9H2Z4 354 aa16.02■□□□□ 0.16
COL9A2-208ENST00000488463 ZNF576Q9H609 170 aa16.02■□□□□ 0.16
COL9A2-208ENST00000488463 SAMM50Q9Y512 469 aa16.02■□□□□ 0.16
COL9A2-208ENST00000488463 CDY2AQ9Y6F7 541 aa16.02■□□□□ 0.16
COL9A2-208ENST00000488463 KDM3AQ9Y4C1 1321 aa16.01■□□□□ 0.15
COL9A2-208ENST00000488463 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.01■□□□□ 0.15
COL9A2-208ENST00000488463 OATP04181 439 aa16.01■□□□□ 0.15
COL9A2-208ENST00000488463 TRIM29Q14134 588 aa16.01■□□□□ 0.15
COL9A2-208ENST00000488463 IKBKEQ14164 716 aa16.01■□□□□ 0.15
COL9A2-208ENST00000488463 MIER3Q7Z3K6 550 aa16.01■□□□□ 0.15
COL9A2-208ENST00000488463 NAP1L4Q99733 375 aaKnown RBP16.01■□□□□ 0.15
COL9A2-208ENST00000488463 AGO3Q9H9G7 860 aaKnown RBP16.01■□□□□ 0.15
COL9A2-208ENST00000488463 TCEAL9Q9UHQ7 104 aa16.01■□□□□ 0.15
COL9A2-208ENST00000488463 TTC3P53804 2025 aa16.01■□□□□ 0.15
COL9A2-208ENST00000488463 KIF28PB7ZC32 967 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 EFCAB14O75071 495 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 RPLP2P05387 115 aaKnown RBP16■□□□□ 0.15
COL9A2-208ENST00000488463 GHRP10912 638 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 TMEM62Q0P6H9 643 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 RSPH3Q86UC2 560 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 NME8Q8N427 588 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 SEPT8Q92599 483 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 FAM167AQ96KS9 214 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 MTMR9Q96QG7 549 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 IFIH1Q9BYX4 1025 aaKnown RBP16■□□□□ 0.15
COL9A2-208ENST00000488463 FOXP1Q9H334 677 aaPredicted RBP16■□□□□ 0.15
COL9A2-208ENST00000488463 CDHR5Q9HBB8 845 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 WRAP73Q9P2S5 460 aaPredicted RBP16■□□□□ 0.15
COL9A2-208ENST00000488463 MSRAQ9UJ68 235 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 SQORQ9Y6N5 450 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 XIRP2A4UGR9 3374 aa16■□□□□ 0.15
COL9A2-208ENST00000488463 TMEM150BA6NC51 233 aa15.99■□□□□ 0.15
COL9A2-208ENST00000488463 GJB5O95377 273 aa15.99■□□□□ 0.15
COL9A2-208ENST00000488463 KCNJ6P48051 423 aa15.99■□□□□ 0.15
COL9A2-208ENST00000488463 IER5Q5VY09 327 aa15.99■□□□□ 0.15
COL9A2-208ENST00000488463 TRMT1LQ7Z2T5 733 aaKnown RBP15.99■□□□□ 0.15
COL9A2-208ENST00000488463 CKAP2LQ8IYA6 745 aa15.99■□□□□ 0.15
COL9A2-208ENST00000488463 LINC01599Q8WXQ3 324 aa15.99■□□□□ 0.15
COL9A2-208ENST00000488463 NIFKQ9BYG3 293 aaKnown RBP15.99■□□□□ 0.15
COL9A2-208ENST00000488463 CELF4Q9BZC1 486 aaKnown RBP15.99■□□□□ 0.15
COL9A2-208ENST00000488463 TRPV2Q9Y5S1 764 aa15.99■□□□□ 0.15
COL9A2-208ENST00000488463 COL4A6Q14031 1691 aa15.99■□□□□ 0.15
COL9A2-208ENST00000488463 LCHNA4D1U4 455 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 GPR32O75388 356 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 CA3P07451 260 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 U2AF2P26368 475 aaKnown RBP eCLIP15.98■□□□□ 0.157e-9■■■■□ 21.1
COL9A2-208ENST00000488463 XKR3Q5GH77 459 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 TSHZ1Q6ZSZ6 1077 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 ANO5Q75V66 913 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 SPRED2Q7Z698 418 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 BANK1Q8NDB2 785 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 TMEM40Q8WWA1 233 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 MYLIPQ8WY64 445 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 APBB2Q92870 758 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 TMEM60Q9H2L4 133 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 NRBP2Q9NSY0 501 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 CEP131Q9UPN4 1083 aa15.98■□□□□ 0.15
COL9A2-208ENST00000488463 PRRC2BQ5JSZ5 2229 aaKnown RBP15.98■□□□□ 0.15
COL9A2-208ENST00000488463 TTC28Q96AY4 2481 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 ARID2Q68CP9 1835 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 IGKV6-21A0A0C4DH24 114 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 MAGEB2O15479 319 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 CD52P31358 61 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 MCM2P49736 904 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 PSMC5P62195 406 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 HTRA4P83105 476 aaPredicted RBP15.97■□□□□ 0.15
COL9A2-208ENST00000488463 TAP1Q03518 808 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 EPHA7Q15375 998 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 SAFBQ15424 915 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL9A2-208ENST00000488463 RTN4RL1Q86UN2 441 aaPredicted RBP15.97■□□□□ 0.15
COL9A2-208ENST00000488463 NOSTRINQ8IVI9 506 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 SLFN12Q8IYM2 578 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 CRIPAKQ8N1N5 446 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 FAM184AQ8NB25 1140 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 TOP1MTQ969P6 601 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 SLC28A3Q9HAS3 691 aa15.97■□□□□ 0.15
COL9A2-208ENST00000488463 ENPP3O14638 875 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 NEMFO60524 1076 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 P4HBP07237 508 aaKnown RBP15.96■□□□□ 0.15
COL9A2-208ENST00000488463 QARSP47897 775 aaKnown RBP15.96■□□□□ 0.15
COL9A2-208ENST00000488463 TOB1P50616 345 aaPredicted RBP15.96■□□□□ 0.15
COL9A2-208ENST00000488463 CLCN3P51790 818 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 DRP2Q13474 957 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 ADGRE1Q14246 886 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 CALCRLQ16602 461 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 PPP2R2DQ66LE6 453 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 EFCAB12Q6NXP0 572 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 LRRC71Q8N4P6 559 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 C4orf32Q8N8J7 132 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 ZNF579Q8NAF0 562 aaKnown RBP15.96■□□□□ 0.15
COL9A2-208ENST00000488463 USP38Q8NB14 1042 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 SP7Q8TDD2 431 aaPredicted RBP15.96■□□□□ 0.15
COL9A2-208ENST00000488463 RAD9AQ99638 391 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 HSD17B14Q9BPX1 270 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 SH2D3AQ9BRG2 576 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 ADAMTS10Q9H324 1103 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 TMX1Q9H3N1 280 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 PRDM12Q9H4Q4 367 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 RGL1Q9NZL6 768 aa15.96■□□□□ 0.15
COL9A2-208ENST00000488463 PADI3Q9ULW8 664 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms