RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 CAPNS1P04632 268 aa6.78□□□□□ -1.32
BRCA1-217ENST00000487825 CYP2C8P10632 490 aa6.78□□□□□ -1.32
BRCA1-217ENST00000487825 DLX2Q07687 328 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-217ENST00000487825 LSAMPQ13449 338 aa6.78□□□□□ -1.32
BRCA1-217ENST00000487825 ZNF827Q17R98 1081 aa6.78□□□□□ -1.32
BRCA1-217ENST00000487825 SLC35F1Q5T1Q4 408 aa6.78□□□□□ -1.32
BRCA1-217ENST00000487825 CD300LDQ6UXZ3 194 aa6.78□□□□□ -1.32
BRCA1-217ENST00000487825 STK32CQ86UX6 486 aa6.78□□□□□ -1.32
BRCA1-217ENST00000487825 RIOX2Q8IUF8 465 aa6.78□□□□□ -1.32
BRCA1-217ENST00000487825 KCTD13Q8WZ19 329 aa6.78□□□□□ -1.32
BRCA1-217ENST00000487825 CLDND1Q9NY35 253 aa6.78□□□□□ -1.32
BRCA1-217ENST00000487825 RTEL1Q9NZ71 1219 aa6.78□□□□□ -1.32
BRCA1-217ENST00000487825 COA3Q9Y2R0 106 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-217ENST00000487825 QRICH2Q9H0J4 1663 aa6.77□□□□□ -1.32
BRCA1-217ENST00000487825 TNRC6CQ9HCJ0 1690 aaKnown RBP6.77□□□□□ -1.32
BRCA1-217ENST00000487825 NCANO14594 1321 aa6.77□□□□□ -1.32
BRCA1-217ENST00000487825 BUD31P41223 144 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-217ENST00000487825 SLC6A11P48066 632 aa6.77□□□□□ -1.33
BRCA1-217ENST00000487825 ZC3H6P61129 1189 aaKnown RBP6.77□□□□□ -1.33
BRCA1-217ENST00000487825 DDB1Q16531 1140 aa6.77□□□□□ -1.33
BRCA1-217ENST00000487825 Q8N1Y9 231 aa6.77□□□□□ -1.33
BRCA1-217ENST00000487825 GORASP1Q9BQQ3 440 aa6.77□□□□□ -1.33
BRCA1-217ENST00000487825 KRTAP4-2Q9BYR5 136 aa6.77□□□□□ -1.33
BRCA1-217ENST00000487825 SPATA6Q9NWH7 488 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-217ENST00000487825 SH3D21A4FU49 640 aa6.76□□□□□ -1.33
BRCA1-217ENST00000487825 HSPA1AP0DMV8 641 aaKnown RBP6.76□□□□□ -1.33
BRCA1-217ENST00000487825 HSPA1BP0DMV9 641 aaKnown RBP6.76□□□□□ -1.33
BRCA1-217ENST00000487825 STAT5AP42229 794 aa6.76□□□□□ -1.33
BRCA1-217ENST00000487825 TESK1Q15569 626 aa6.76□□□□□ -1.33
BRCA1-217ENST00000487825 NT5DC1Q5TFE4 455 aa6.76□□□□□ -1.33
BRCA1-217ENST00000487825 USP53Q70EK8 1073 aa6.76□□□□□ -1.33
BRCA1-217ENST00000487825 TRIM55Q9BYV6 548 aa6.76□□□□□ -1.33
BRCA1-217ENST00000487825 BRD4O60885 1362 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-217ENST00000487825 ANKRD30BQ9BXX2 1392 aa6.76□□□□□ -1.33
BRCA1-217ENST00000487825 TNRC18O15417 2968 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-217ENST00000487825 ABCC6O95255 1503 aa6.76□□□□□ -1.33
BRCA1-217ENST00000487825 ADGRF5Q8IZF2 1346 aa6.76□□□□□ -1.33
BRCA1-217ENST00000487825 BRCA1P38398 1863 aaKnown RBP6.75□□□□□ -1.33
BRCA1-217ENST00000487825 EIF3AQ14152 1382 aaKnown RBP6.75□□□□□ -1.33
BRCA1-217ENST00000487825 H7BY64 318 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 DLX3O60479 287 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 MAP4K2Q12851 820 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 RAB33AQ14088 237 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 HSP90AA2PQ14568 343 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-217ENST00000487825 NAALADL2Q58DX5 795 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 STEAP3Q658P3 488 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 FRMD5Q7Z6J6 570 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 MIB1Q86YT6 1006 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 CARFQ8N187 725 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 YIPF4Q9BSR8 244 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 C11orf84Q9BUA3 381 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-217ENST00000487825 NTMQ9P121 344 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 PNPLA7Q6ZV29 1317 aa6.75□□□□□ -1.33
BRCA1-217ENST00000487825 USP54Q70EL1 1684 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 KIF13BQ9NQT8 1826 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 KIAA1551Q9HCM1 1747 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 IQCA1LA6NCM1 817 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 HGSO14964 777 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-217ENST00000487825 PRODHO43272 600 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 SMARCA5O60264 1052 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-217ENST00000487825 MSCO60682 206 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 DGKIO75912 1065 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 STK10O94804 968 aaKnown RBP6.74□□□□□ -1.33
BRCA1-217ENST00000487825 SYN1P17600 705 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 SARSP49591 514 aaKnown RBP6.74□□□□□ -1.33
BRCA1-217ENST00000487825 TTLL7Q6ZT98 887 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 ZC3H18Q86VM9 953 aaKnown RBP6.74□□□□□ -1.33
BRCA1-217ENST00000487825 FAM126BQ8IXS8 530 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 LINC00482Q8N8I6 264 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 AARSD1Q9BTE6 412 aaKnown RBP6.74□□□□□ -1.33
BRCA1-217ENST00000487825 ARHGEF4Q9NR80 690 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 USP40Q9NVE5 1235 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 NPFFR2Q9Y5X5 522 aa6.74□□□□□ -1.33
BRCA1-217ENST00000487825 TAF1LQ8IZX4 1826 aa6.73□□□□□ -1.33
BRCA1-217ENST00000487825 PRICKLE3O43900 615 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-217ENST00000487825 FAM50AQ14320 339 aaKnown RBP6.73□□□□□ -1.33
BRCA1-217ENST00000487825 ARRDC4Q8NCT1 418 aa6.73□□□□□ -1.33
BRCA1-217ENST00000487825 CXorf38Q8TB03 319 aa6.73□□□□□ -1.33
BRCA1-217ENST00000487825 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.73□□□□□ -1.33
BRCA1-217ENST00000487825 SGSM3Q96HU1 749 aa6.73□□□□□ -1.33
BRCA1-217ENST00000487825 TEPSINQ96N21 525 aa6.73□□□□□ -1.33
BRCA1-217ENST00000487825 PHF20Q9BVI0 1012 aa6.73□□□□□ -1.33
BRCA1-217ENST00000487825 JAM3Q9BX67 310 aa6.73□□□□□ -1.33
BRCA1-217ENST00000487825 PCDHB4Q9Y5E5 795 aa6.73□□□□□ -1.33
BRCA1-217ENST00000487825 PDE4DIPQ5VU43 2346 aa6.73□□□□□ -1.33
BRCA1-217ENST00000487825 ARFGEF1Q9Y6D6 1849 aa6.73□□□□□ -1.33
BRCA1-217ENST00000487825 USP19O94966 1318 aa6.73□□□□□ -1.33
BRCA1-217ENST00000487825 C5P01031 1676 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 PABPC1P11940 636 aaKnown RBP6.72□□□□□ -1.33
BRCA1-217ENST00000487825 THBS2P35442 1172 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 FSTL1Q12841 308 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 CR1LQ2VPA4 569 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 YOD1Q5VVQ6 348 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-217ENST00000487825 KCNT2Q6UVM3 1135 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 FERMT3Q86UX7 667 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 CKAP2LQ8IYA6 745 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 KYQ8NBH2 561 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 DDX1Q92499 740 aaKnown RBP6.72□□□□□ -1.33
BRCA1-217ENST00000487825 CDIP1Q9H305 208 aa6.72□□□□□ -1.33
BRCA1-217ENST00000487825 EPB41L1Q9H4G0 881 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms