RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 RBM47A0AV96 593 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 ESPNB1AK53 854 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 IGF2BP3O00425 579 aaKnown RBP eCLIP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 NOP56O00567 594 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 PDXKO00764 312 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 KIF3CO14782 793 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 N4BP3O15049 544 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 ZBTB39O15060 712 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 TLR2O60603 784 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 HIP1RO75146 1068 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 DGAT1O75907 488 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 TOMM70O94826 608 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 GCNT3O95395 438 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 GGPS1O95749 300 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 ALDH1A1P00352 501 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 TXNP10599 105 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 PRKCSHP14314 528 aaPredicted RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 SCP2P22307 547 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 RPL13P26373 211 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 SLC26A2P50443 739 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 APLP1P51693 650 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 COPB1P53618 953 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 PMS1P54277 932 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 SP2Q02086 613 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 PRKCEQ02156 737 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 SP4Q02446 784 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 IRF5Q13568 498 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 LAMC2Q13753 1193 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 KRT31Q15323 416 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 LRRC41Q15345 812 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 UGCGQ16739 394 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 KNOP1Q1ED39 458 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 EDRF1Q3B7T1 1238 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 HSP90AA4PQ58FG1 418 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 ODR4Q5SWX8 454 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 CELF3Q5SZQ8 465 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 SPECC1LQ69YQ0 1117 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 MAMDC4Q6UXC1 1216 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 ANO5Q75V66 913 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 ARMCX2Q7L311 632 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 EPM2AIP1Q7L775 607 aaPredicted RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 EEPD1Q7L9B9 569 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 APTXQ7Z2E3 356 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 TMC6Q7Z403 805 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 FILIP1Q7Z7B0 1213 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 CCDC60Q8IWA6 550 aaPredicted RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 FBXO16Q8IX29 292 aaPredicted RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 FAM178BQ8IXR5 827 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 DHX37Q8IY37 1157 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 EXOC8Q8IYI6 725 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 GOLGA5Q8TBA6 731 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 AFAP1L1Q8TED9 768 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 KIFAP3Q92845 792 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 CEP170P1Q96L14 293 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 NAP1L5Q96NT1 182 aaPredicted RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 R3HDMLQ9H3Y0 253 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 RTN4Q9NQC3 1192 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 TBC1D7Q9P0N9 293 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 CPA4Q9UI42 421 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 TRAF3IP3Q9Y228 551 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 ZKSCAN5Q9Y2L8 839 aa6.8□□□□□ -1.32
VAMP3-203ENST00000487194 ZNFX1Q9P2E3 1918 aaKnown RBP6.8□□□□□ -1.32
VAMP3-203ENST00000487194 ITIH6Q6UXX5 1313 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 PLXNB2O15031 1838 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 A0A1W2PQC6 194 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 GSTTP1A0A1W2PQM5 241 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 FAM155AB1AL88 458 aaPredicted RBP6.79□□□□□ -1.32
VAMP3-203ENST00000487194 RSPH10B2B2RC85 870 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 H0YCG3 227 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 CETN3O15182 167 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 NKRFO15226 690 aaKnown RBP eCLIP6.79□□□□□ -1.32
VAMP3-203ENST00000487194 ZNF862O60290 1169 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 USO1O60763 962 aaKnown RBP6.79□□□□□ -1.32
VAMP3-203ENST00000487194 COBLO75128 1261 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 STBD1O95210 358 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 GH1P01241 217 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 OATP04181 439 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 TPM1P09493 284 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 RSPH10BP0C881 870 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 MYBP10242 640 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 PLS3P13797 630 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 PTGS1P23219 599 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 SFPQP23246 707 aaKnown RBP eCLIP6.79□□□□□ -1.32
VAMP3-203ENST00000487194 TCF7P36402 384 aaPredicted RBP6.79□□□□□ -1.32
VAMP3-203ENST00000487194 RFC5P40937 340 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 MTIF2P46199 727 aaKnown RBP6.79□□□□□ -1.32
VAMP3-203ENST00000487194 TM4SF4P48230 202 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 DNM2P50570 870 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 STAT5BP51692 787 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 SMTNP53814 917 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 RTP1P59025 263 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 SNRPFP62306 86 aaKnown RBP6.79□□□□□ -1.32
VAMP3-203ENST00000487194 MAP2K5Q13163 448 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 MAPK7Q13164 816 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 TRIM14Q14142 442 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 NFIL3Q16649 462 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 LY6KQ17RY6 165 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 ZCWPW2Q504Y3 356 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 FAM102BQ5T8I3 360 aa6.79□□□□□ -1.32
VAMP3-203ENST00000487194 UTP14CQ5TAP6 766 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms