RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 CCDC60Q8IWA6 550 aaPredicted RBP9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 MYOCDQ8IZQ8 938 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 GLIS3Q8NEA6 775 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 FGFBP2Q9BYJ0 223 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 KATNBL1Q9H079 304 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 THAP9Q9H5L6 903 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 VTA1Q9NP79 307 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 GABBR1Q9UBS5 961 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 SEL1LQ9UBV2 794 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 LIMA1Q9UHB6 759 aaKnown RBP9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 CPA4Q9UI42 421 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 TELO2Q9Y4R8 837 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 COL4A3BPQ9Y5P4 624 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 A0A0C4DFX4 3053 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 PLXNA1Q9UIW2 1896 aa9.53□□□□□ -0.88
NUDCD3-209ENST00000487118 CUL9Q8IWT3 2517 aa9.52□□□□□ -0.88
NUDCD3-209ENST00000487118 A0A1B0GTH6 734 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 LRRC10BA6NIK2 292 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 BACH1O14867 736 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 TLR2O60603 784 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 FAM13AO94988 1023 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 KIF20AO95235 890 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 GGPS1O95749 300 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 SERPINC1P01008 464 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 UBASH3AP57075 661 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 RAD51AP2Q09MP3 1159 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 LRRC41Q15345 812 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 TPD52L1Q16890 204 aaPredicted RBP9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 CELF3Q5SZQ8 465 aaKnown RBP9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 MORN1Q5T089 497 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 ANKRD40Q6AI12 368 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 SWSAP1Q6NVH7 229 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 TAPT1Q6NXT6 567 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 ANO5Q75V66 913 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 OTUD6AQ7L8S5 288 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 IRF2BP1Q8IU81 584 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 FBXO16Q8IX29 292 aaPredicted RBP9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 ZC3H3Q8IXZ2 948 aaKnown RBP9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 DAW1Q8N136 415 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 MSL3Q8N5Y2 521 aaKnown RBP9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 AFAP1L1Q8TED9 768 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 SCFD2Q8WU76 684 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 SCFD1Q8WVM8 642 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 TRIM44Q96DX7 344 aaPredicted RBP9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 MAML3Q96JK9 1138 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 TRIM47Q96LD4 638 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 FIZ1Q96SL8 496 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 DOCK5Q9H7D0 1870 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 PARVGQ9HBI0 331 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 INTS13Q9NVM9 706 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 UBE4BO95155 1302 aa9.52□□□□□ -0.89
NUDCD3-209ENST00000487118 WDR81Q562E7 1941 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 GOLGA6L6A8MZA4 724 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 EIF3DO15371 548 aaKnown RBP eCLIP9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 HIP1RO75146 1068 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 LGR5O75473 907 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 SNAI1O95863 264 aaPredicted RBP9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 TPM3P06753 285 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 HOXC6P09630 235 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 MAPTP10636 758 aaKnown RBP9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 ATP4AP20648 1035 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 CDK11BP21127 795 aaKnown RBP9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 EEF1GP26641 437 aaKnown RBP9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 CASP5P51878 434 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 PRKCEQ02156 737 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 IRF5Q13568 498 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 TTLL4Q14679 1199 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 NR1I3Q14994 352 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 LY6KQ17RY6 165 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 XKR9Q5GH70 373 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 XKR3Q5GH77 459 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 TCP11X2Q5H9J9 407 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 PLA2G4FQ68DD2 849 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 EEPD1Q7L9B9 569 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 CSGALNACT2Q8N6G5 542 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 ZNF507Q8TCN5 953 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 SEPT1Q8WYJ6 367 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 USP6NLQ92738 828 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 NAP1L5Q96NT1 182 aaPredicted RBP9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 CTAGE1Q96RT6 745 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 PCYT2Q99447 389 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 TSG101Q99816 390 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 STRA6Q9BX79 667 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 SRRTQ9BXP5 876 aaKnown RBP9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 KCTD10Q9H3F6 313 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 ZHX3Q9H4I2 956 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 ZFYVE28Q9HCC9 887 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 ZNF302Q9NR11 478 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 TBC1D7Q9P0N9 293 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 IMPACTQ9P2X3 320 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 ARID2Q68CP9 1835 aa9.51□□□□□ -0.89
NUDCD3-209ENST00000487118 TMEM150BA6NC51 233 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 KCNJ18B7U540 433 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 GPR25O00155 361 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 SORBS3O60504 671 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 USO1O60763 962 aaKnown RBP9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 PPP1R37O75864 691 aa9.5□□□□□ -0.89
NUDCD3-209ENST00000487118 FGFR1OPO95684 399 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms