RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 UGCGQ16739 394 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 TRIM71Q2Q1W2 868 aaKnown RBP11.48□□□□□ -0.57
NEK4-204ENST00000487068 MTERF2Q49AM1 385 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 TJAP1Q5JTD0 557 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 ZNF484Q5JVG2 852 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 TTC38Q5R3I4 469 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 CNKSR3Q6P9H4 555 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 C16orf59Q7L2K0 433 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 HSCBQ8IWL3 235 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 METTL13Q8N6R0 699 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 HERVK_113Q902F9 699 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 RNF25Q96BH1 459 aaPredicted RBP11.48□□□□□ -0.57
NEK4-204ENST00000487068 SCLT1Q96NL6 688 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 KCNMB3Q9NPA1 279 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 CXXC1Q9P0U4 656 aaPredicted RBP11.48□□□□□ -0.57
NEK4-204ENST00000487068 MAFBQ9Y5Q3 323 aaPredicted RBP11.48□□□□□ -0.57
NEK4-204ENST00000487068 COL4A4P53420 1690 aaPredicted RBP11.48□□□□□ -0.57
NEK4-204ENST00000487068 KIAA1671Q9BY89 1806 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 RALGAPA2Q2PPJ7 1873 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 PRUNE2Q8WUY3 3088 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.47□□□□□ -0.57
NEK4-204ENST00000487068 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.47□□□□□ -0.57
NEK4-204ENST00000487068 MBLAC1A4D2B0 266 aaPredicted RBP11.47□□□□□ -0.57
NEK4-204ENST00000487068 VPS37CA5D8V6 355 aaPredicted RBP11.47□□□□□ -0.57
NEK4-204ENST00000487068 KIF28PB7ZC32 967 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 K7ELQ4 463 aaPredicted RBP11.47□□□□□ -0.57
NEK4-204ENST00000487068 STK25O00506 426 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 WNT7AO00755 349 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 DKC1O60832 514 aaKnown RBP eCLIP11.47□□□□□ -0.57
NEK4-204ENST00000487068 NBNO60934 754 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 RPLP2P05387 115 aaKnown RBP11.47□□□□□ -0.57
NEK4-204ENST00000487068 GHRP10912 638 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 DNAJB2P25686 324 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 KLRC1P26715 233 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 ADAM17P78536 824 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 MRPS6P82932 125 aaKnown RBP11.47□□□□□ -0.57
NEK4-204ENST00000487068 CYP4A11Q02928 519 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 PPP2R5CQ13362 524 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 ZNF174Q15697 407 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 TMEM266Q2M3C6 531 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 MARCH8Q5T0T0 291 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 IER5Q5VY09 327 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 LARP1BQ659C4 914 aaKnown RBP11.47□□□□□ -0.57
NEK4-204ENST00000487068 MTHFD1LQ6UB35 978 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 SEPT8Q92599 483 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 FAM212AQ96EL1 285 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 MAP7D2Q96T17 732 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 PPP1R16BQ96T49 567 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 TTC12Q9H892 705 aaPredicted RBP11.47□□□□□ -0.57
NEK4-204ENST00000487068 NRBP2Q9NSY0 501 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 VAV3Q9UKW4 847 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 PCDHA12Q9UN75 941 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 CDY2AQ9Y6F7 541 aa11.47□□□□□ -0.57
NEK4-204ENST00000487068 GRXCR1A8MXD5 290 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 TNFRSF10AO00220 468 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 EML1O00423 815 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 ZNF862O60290 1169 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 BAIAP3O94812 1187 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 OR52Z1P0C646 297 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 ATP2A2P16615 1042 aaKnown RBP11.46□□□□□ -0.57
NEK4-204ENST00000487068 ATP4AP20648 1035 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 COL9A1P20849 921 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 TMOD1P28289 359 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 PSMC5P62195 406 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 TBC1D8BQ0IIM8 1120 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 IKBKEQ14164 716 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 GRIN2CQ14957 1233 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 USP38Q8NB14 1042 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 HAS1Q92839 578 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 SLC9A7Q96T83 725 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 LXNQ9BS40 222 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 IFIH1Q9BYX4 1025 aaKnown RBP11.46□□□□□ -0.57
NEK4-204ENST00000487068 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.57
NEK4-204ENST00000487068 AKT3Q9Y243 479 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 PCDHA2Q9Y5H9 948 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 TRPV2Q9Y5S1 764 aa11.46□□□□□ -0.57
NEK4-204ENST00000487068 SMIM35A0A1B0GVV1 85 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 TMEM150BA6NC51 233 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 POTEMA6NI47 508 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 DDX11L8A8MPP1 907 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 C22orf31O95567 290 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 PDCP20941 246 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 QARSP47897 775 aaKnown RBP11.45□□□□□ -0.58
NEK4-204ENST00000487068 TRAPPC10P48553 1259 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 CLCN3P51790 818 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 ORC2Q13416 577 aaPredicted RBP11.45□□□□□ -0.58
NEK4-204ENST00000487068 CTTNQ14247 550 aaKnown RBP11.45□□□□□ -0.58
NEK4-204ENST00000487068 MBTPS1Q14703 1052 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 XKR3Q5GH77 459 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 PLA2G4FQ68DD2 849 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 TRAF7Q6Q0C0 670 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 LRRC71Q8N4P6 559 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 DBF4BQ8NFT6 615 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 DYDC2Q96IM9 177 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 SH2D3AQ9BRG2 576 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 ZBED2Q9BTP6 218 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 SUGCTQ9HAC7 445 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 BMP2KQ9NSY1 1161 aaPredicted RBP11.45□□□□□ -0.58
NEK4-204ENST00000487068 MSRAQ9UJ68 235 aa11.45□□□□□ -0.58
NEK4-204ENST00000487068 FNDC1Q4ZHG4 1894 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms