RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 FBXO47Q5MNV8 452 aa17.98■□□□□ 0.47
HDAC8-218ENST00000486704 PPP2R2DQ66LE6 453 aa17.98■□□□□ 0.47
HDAC8-218ENST00000486704 TSHZ1Q6ZSZ6 1077 aa17.98■□□□□ 0.47
HDAC8-218ENST00000486704 USP38Q8NB14 1042 aa17.98■□□□□ 0.47
HDAC8-218ENST00000486704 TRPV2Q9Y5S1 764 aa17.98■□□□□ 0.47
HDAC8-218ENST00000486704 TTC3P53804 2025 aa17.98■□□□□ 0.47
HDAC8-218ENST00000486704 AMHP03971 560 aa17.97■□□□□ 0.47
HDAC8-218ENST00000486704 CA3P07451 260 aa17.97■□□□□ 0.47
HDAC8-218ENST00000486704 GHRP10912 638 aa17.97■□□□□ 0.47
HDAC8-218ENST00000486704 MYOGP15173 224 aa17.97■□□□□ 0.47
HDAC8-218ENST00000486704 SAFBQ15424 915 aaKnown RBP eCLIP17.97■□□□□ 0.47
HDAC8-218ENST00000486704 FAM43BQ6ZT52 329 aaPredicted RBP17.97■□□□□ 0.47
HDAC8-218ENST00000486704 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
HDAC8-218ENST00000486704 SLFN12Q8IYM2 578 aa17.97■□□□□ 0.47
HDAC8-218ENST00000486704 MYLIPQ8WY64 445 aa17.97■□□□□ 0.47
HDAC8-218ENST00000486704 HAS1Q92839 578 aa17.97■□□□□ 0.47
HDAC8-218ENST00000486704 C8orf76Q96K31 380 aa17.97■□□□□ 0.47
HDAC8-218ENST00000486704 MAGEB2O15479 319 aa17.96■□□□□ 0.47
HDAC8-218ENST00000486704 TLL1O43897 1013 aa17.96■□□□□ 0.47
HDAC8-218ENST00000486704 FOSBP53539 338 aa17.96■□□□□ 0.47
HDAC8-218ENST00000486704 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.96■□□□□ 0.47
HDAC8-218ENST00000486704 KIAA0319LQ8IZA0 1049 aa17.96■□□□□ 0.47
HDAC8-218ENST00000486704 FBXO18Q8NFZ0 1043 aa17.96■□□□□ 0.47
HDAC8-218ENST00000486704 CELF4Q9BZC1 486 aaKnown RBP17.96■□□□□ 0.47
HDAC8-218ENST00000486704 NRBP2Q9NSY0 501 aa17.96■□□□□ 0.47
HDAC8-218ENST00000486704 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.95■□□□□ 0.46
HDAC8-218ENST00000486704 FOSL2P15408 326 aa17.95■□□□□ 0.46
HDAC8-218ENST00000486704 MCM2P49736 904 aa17.95■□□□□ 0.46
HDAC8-218ENST00000486704 SPIRE1Q08AE8 756 aa17.95■□□□□ 0.46
HDAC8-218ENST00000486704 LINC01465Q8N7H1 131 aa17.95■□□□□ 0.46
HDAC8-218ENST00000486704 FAM184AQ8NB25 1140 aa17.95■□□□□ 0.46
HDAC8-218ENST00000486704 RAD9AQ99638 391 aa17.95■□□□□ 0.46
HDAC8-218ENST00000486704 FOXP1Q9H334 677 aaPredicted RBP17.95■□□□□ 0.46
HDAC8-218ENST00000486704 EML1O00423 815 aa17.94■□□□□ 0.46
HDAC8-218ENST00000486704 NEMFO60524 1076 aa17.94■□□□□ 0.46
HDAC8-218ENST00000486704 STBD1O95210 358 aa17.94■□□□□ 0.46
HDAC8-218ENST00000486704 BAG4O95429 457 aaKnown RBP17.94■□□□□ 0.46
HDAC8-218ENST00000486704 HTRA4P83105 476 aaPredicted RBP17.94■□□□□ 0.46
HDAC8-218ENST00000486704 TAP1Q03518 808 aa17.94■□□□□ 0.46
HDAC8-218ENST00000486704 TMEM62Q0P6H9 643 aa17.94■□□□□ 0.46
HDAC8-218ENST00000486704 TARBP2Q15633 366 aaKnown RBP17.94■□□□□ 0.46
HDAC8-218ENST00000486704 XKR3Q5GH77 459 aa17.94■□□□□ 0.46
HDAC8-218ENST00000486704 TMCO2Q7Z6W1 182 aaPredicted RBP17.94■□□□□ 0.46
HDAC8-218ENST00000486704 MYOCDQ8IZQ8 938 aa17.94■□□□□ 0.46
HDAC8-218ENST00000486704 ZNF710Q8N1W2 664 aa17.94■□□□□ 0.46
HDAC8-218ENST00000486704 ZBED2Q9BTP6 218 aa17.94■□□□□ 0.46
HDAC8-218ENST00000486704 NIFKQ9BYG3 293 aaKnown RBP17.94■□□□□ 0.46
HDAC8-218ENST00000486704 AGO3Q9H9G7 860 aaKnown RBP17.94■□□□□ 0.46
HDAC8-218ENST00000486704 EYSQ5T1H1 3165 aa17.94■□□□□ 0.46
HDAC8-218ENST00000486704 RBAK-RBAKDNI3L0D1 243 aa17.93■□□□□ 0.46
HDAC8-218ENST00000486704 DKC1O60832 514 aaKnown RBP eCLIP17.93■□□□□ 0.46
HDAC8-218ENST00000486704 ARHGEF15O94989 841 aa17.93■□□□□ 0.46
HDAC8-218ENST00000486704 CD2BP2O95400 341 aaKnown RBP17.93■□□□□ 0.46
HDAC8-218ENST00000486704 PSMC5P62195 406 aa17.93■□□□□ 0.46
HDAC8-218ENST00000486704 GUCY1B3Q02153 619 aa17.93■□□□□ 0.46
HDAC8-218ENST00000486704 ORC2Q13416 577 aaPredicted RBP17.93■□□□□ 0.46
HDAC8-218ENST00000486704 TRMT1LQ7Z2T5 733 aaKnown RBP17.93■□□□□ 0.46
HDAC8-218ENST00000486704 TOP1MTQ969P6 601 aa17.93■□□□□ 0.46
HDAC8-218ENST00000486704 TMX3Q96JJ7 454 aa17.93■□□□□ 0.46
HDAC8-218ENST00000486704 CEP89Q96ST8 783 aa17.93■□□□□ 0.46
HDAC8-218ENST00000486704 GAS2L1Q99501 681 aaPredicted RBP17.93■□□□□ 0.46
HDAC8-218ENST00000486704 FTHL17Q9BXU8 183 aa17.93■□□□□ 0.46
HDAC8-218ENST00000486704 PRDM12Q9H4Q4 367 aa17.93■□□□□ 0.46
HDAC8-218ENST00000486704 KIF3AQ9Y496 699 aa17.93■□□□□ 0.46
HDAC8-218ENST00000486704 INSL6Q9Y581 213 aa17.93■□□□□ 0.46
HDAC8-218ENST00000486704 LCHNA4D1U4 455 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 WNT7AO00755 349 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 MARCH6O60337 910 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 P4HBP07237 508 aaKnown RBP17.92■□□□□ 0.46
HDAC8-218ENST00000486704 TMOD1P28289 359 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 CD52P31358 61 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 QARSP47897 775 aaKnown RBP17.92■□□□□ 0.46
HDAC8-218ENST00000486704 TBC1D8BQ0IIM8 1120 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 PAK2Q13177 524 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 EPHA7Q15375 998 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 CALCRLQ16602 461 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 METTL13Q8N6R0 699 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 BANK1Q8NDB2 785 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 MAFAQ8NHW3 353 aaPredicted RBP17.92■□□□□ 0.46
HDAC8-218ENST00000486704 SP7Q8TDD2 431 aaPredicted RBP17.92■□□□□ 0.46
HDAC8-218ENST00000486704 MAP7D2Q96T17 732 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 SEPT9Q9UHD8 586 aaPredicted RBP17.92■□□□□ 0.46
HDAC8-218ENST00000486704 KIAA1671Q9BY89 1806 aa17.92■□□□□ 0.46
HDAC8-218ENST00000486704 CLCN3P51790 818 aa17.91■□□□□ 0.46
HDAC8-218ENST00000486704 CRYBB1P53674 252 aaPredicted RBP17.91■□□□□ 0.46
HDAC8-218ENST00000486704 ODR4Q5SWX8 454 aa17.91■□□□□ 0.46
HDAC8-218ENST00000486704 EFCAB12Q6NXP0 572 aa17.91■□□□□ 0.46
HDAC8-218ENST00000486704 NOSTRINQ8IVI9 506 aa17.91■□□□□ 0.46
HDAC8-218ENST00000486704 MTMR9Q96QG7 549 aa17.91■□□□□ 0.46
HDAC8-218ENST00000486704 BACH2Q9BYV9 841 aa17.91■□□□□ 0.46
HDAC8-218ENST00000486704 PADI3Q9ULW8 664 aa17.91■□□□□ 0.46
HDAC8-218ENST00000486704 PPME1Q9Y570 386 aa17.91■□□□□ 0.46
HDAC8-218ENST00000486704 IGKV6-21A0A0C4DH24 114 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 GPR32O75388 356 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 VTNP04004 478 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 U2AF2P26368 475 aaKnown RBP eCLIP17.9■□□□□ 0.46
HDAC8-218ENST00000486704 TRAPPC10P48553 1259 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 NCAPH2Q6IBW4 605 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 ANO5Q75V66 913 aa17.9■□□□□ 0.46
HDAC8-218ENST00000486704 C4orf19Q8IY42 314 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms