RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 EFCAB14O75071 495 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 STBD1O95210 358 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 ATP2A2P16615 1042 aaKnown RBP20.42■□□□□ 0.86
COL1A1-207ENST00000486572 KCNJ6P48051 423 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 TMEM62Q0P6H9 643 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 IKBKEQ14164 716 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 NBR1Q14596 966 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 TCTN1Q2MV58 587 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 KIAA0319LQ8IZA0 1049 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 METTL13Q8N6R0 699 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 DBF4BQ8NFT6 615 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 SEPT8Q92599 483 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 LXNQ9BS40 222 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 OSBPL7Q9BZF2 842 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 TRPV2Q9Y5S1 764 aa20.42■□□□□ 0.86
COL1A1-207ENST00000486572 DDX11L8A8MPP1 907 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 GHRP10912 638 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 PDCP20941 246 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 DNAJB2P25686 324 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 TOB1P50616 345 aaPredicted RBP20.41■□□□□ 0.86
COL1A1-207ENST00000486572 WDR5P61964 334 aaKnown RBP20.41■□□□□ 0.86
COL1A1-207ENST00000486572 CYP4A11Q02928 519 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 TBC1D8BQ0IIM8 1120 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 LPIN1Q14693 890 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 TARBP2Q15633 366 aaKnown RBP20.41■□□□□ 0.86
COL1A1-207ENST00000486572 MTERF2Q49AM1 385 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 RILPL1Q5EBL4 403 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 NEK9Q8TD19 979 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 APBB2Q92870 758 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 DYDC2Q96IM9 177 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 IFIH1Q9BYX4 1025 aaKnown RBP20.41■□□□□ 0.86
COL1A1-207ENST00000486572 RGL1Q9NZL6 768 aa20.41■□□□□ 0.86
COL1A1-207ENST00000486572 WRAP73Q9P2S5 460 aaPredicted RBP20.41■□□□□ 0.86
COL1A1-207ENST00000486572 TMEM150BA6NC51 233 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 POTEMA6NI47 508 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 RBAK-RBAKDNI3L0D1 243 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 LAMA2P24043 3122 aaKnown RBP20.4■□□□□ 0.86
COL1A1-207ENST00000486572 FBXO47Q5MNV8 452 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 ANO5Q75V66 913 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 HSCBQ8IWL3 235 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 C4orf19Q8IY42 314 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 PHOSPHO2Q8TCD6 241 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 EIF2AK1Q9BQI3 630 aaKnown RBP20.4■□□□□ 0.86
COL1A1-207ENST00000486572 PBX4Q9BYU1 374 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 CELF4Q9BZC1 486 aaKnown RBP20.4■□□□□ 0.86
COL1A1-207ENST00000486572 ZSWIM4Q9H7M6 989 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 KDM3AQ9Y4C1 1321 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 PCDHB6Q9Y5E3 794 aa20.4■□□□□ 0.86
COL1A1-207ENST00000486572 TMOD1P28289 359 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 CLCN3P51790 818 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 CTTNQ14247 550 aaKnown RBP20.39■□□□□ 0.85
COL1A1-207ENST00000486572 RAB30Q15771 203 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 ZNF697Q5TEC3 545 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 PLA2G4FQ68DD2 849 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 EFCAB12Q6NXP0 572 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 TSHZ1Q6ZSZ6 1077 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 LRRC71Q8N4P6 559 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 LINC01465Q8N7H1 131 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 USP38Q8NB14 1042 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 CEP89Q96ST8 783 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 MAP7D2Q96T17 732 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 HSD17B14Q9BPX1 270 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 SH2D3AQ9BRG2 576 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 SQORQ9Y6N5 450 aa20.39■□□□□ 0.85
COL1A1-207ENST00000486572 SZT2Q5T011 3432 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 TMEM265A0A087WTH1 108 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 VPS37CA5D8V6 355 aaPredicted RBP20.38■□□□□ 0.85
COL1A1-207ENST00000486572 SLITRK3O94933 977 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 YWHABP31946 246 aaKnown RBP20.38■□□□□ 0.85
COL1A1-207ENST00000486572 PBX2P40425 430 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 TECP42680 631 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 MKRN4PQ13434 485 aaPredicted RBP20.38■□□□□ 0.85
COL1A1-207ENST00000486572 TMEM266Q2M3C6 531 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 Q7L0L9 218 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 TPH2Q8IWU9 490 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 DEFB123Q8N688 67 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 C4orf32Q8N8J7 132 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 TIFAQ96CG3 184 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 SUGCTQ9HAC7 445 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 CYP26B1Q9NR63 512 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.38■□□□□ 0.85
COL1A1-207ENST00000486572 MSRAQ9UJ68 235 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 AKT3Q9Y243 479 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 GINS2Q9Y248 185 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 PPME1Q9Y570 386 aa20.38■□□□□ 0.85
COL1A1-207ENST00000486572 LAD1O00515 517 aa20.37■□□□□ 0.85
COL1A1-207ENST00000486572 LYPLA2O95372 231 aa20.37■□□□□ 0.85
COL1A1-207ENST00000486572 VTNP04004 478 aa20.37■□□□□ 0.85
COL1A1-207ENST00000486572 DEFB103AP81534 67 aa20.37■□□□□ 0.85
COL1A1-207ENST00000486572 PTGDRQ13258 359 aa20.37■□□□□ 0.85
COL1A1-207ENST00000486572 OTUD6AQ7L8S5 288 aa20.37■□□□□ 0.85
COL1A1-207ENST00000486572 HERC6Q8IVU3 1022 aa20.37■□□□□ 0.85
COL1A1-207ENST00000486572 AGO3Q9H9G7 860 aaKnown RBP20.37■□□□□ 0.85
COL1A1-207ENST00000486572 FOXD4L1Q9NU39 408 aa20.37■□□□□ 0.85
COL1A1-207ENST00000486572 PCDHA11Q9Y5I1 949 aa20.37■□□□□ 0.85
COL1A1-207ENST00000486572 MICAL3Q7RTP6 2002 aa20.37■□□□□ 0.85
COL1A1-207ENST00000486572 EVPLQ92817 2033 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 PTPRSQ13332 1948 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 IGKV6-21A0A0C4DH24 114 aa20.36■□□□□ 0.85
COL1A1-207ENST00000486572 MAFO75444 373 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms