RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 COL19A1Q14993 1142 aa25.41■■□□□ 1.66
SREBF1-214ENST00000486311 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.41■■□□□ 1.66
SREBF1-214ENST00000486311 BBXQ8WY36 941 aaPredicted RBP25.41■■□□□ 1.66
SREBF1-214ENST00000486311 TMX1Q9H3N1 280 aa25.41■■□□□ 1.66
SREBF1-214ENST00000486311 TCEAL9Q9UHQ7 104 aa25.41■■□□□ 1.66
SREBF1-214ENST00000486311 EDIL3O43854 480 aa25.4■■□□□ 1.66
SREBF1-214ENST00000486311 C22orf31O95567 290 aa25.4■■□□□ 1.66
SREBF1-214ENST00000486311 STAG3L1P0CL83 205 aa25.4■■□□□ 1.66
SREBF1-214ENST00000486311 TMEM266Q2M3C6 531 aa25.4■■□□□ 1.66
SREBF1-214ENST00000486311 CKAP2LQ8IYA6 745 aa25.4■■□□□ 1.66
SREBF1-214ENST00000486311 CMTR2Q8IYT2 770 aaKnown RBP25.4■■□□□ 1.66
SREBF1-214ENST00000486311 NEK9Q8TD19 979 aa25.4■■□□□ 1.66
SREBF1-214ENST00000486311 PABPC5Q96DU9 382 aaKnown RBP25.4■■□□□ 1.66
SREBF1-214ENST00000486311 PLVAPQ9BX97 442 aa25.4■■□□□ 1.66
SREBF1-214ENST00000486311 ERVK-5Q9HDB9 667 aa25.4■■□□□ 1.66
SREBF1-214ENST00000486311 RAPGEFL1Q9UHV5 662 aa25.4■■□□□ 1.66
SREBF1-214ENST00000486311 TTC3P53804 2025 aa25.39■■□□□ 1.66
SREBF1-214ENST00000486311 GRM6O15303 877 aa25.39■■□□□ 1.66
SREBF1-214ENST00000486311 ERICH6BQ5W0A0 696 aa25.39■■□□□ 1.66
SREBF1-214ENST00000486311 CDHR5Q9HBB8 845 aa25.39■■□□□ 1.66
SREBF1-214ENST00000486311 GABBR1Q9UBS5 961 aa25.39■■□□□ 1.66
SREBF1-214ENST00000486311 GINS2Q9Y248 185 aa25.39■■□□□ 1.66
SREBF1-214ENST00000486311 NOC2LQ9Y3T9 749 aaKnown RBP25.39■■□□□ 1.66
SREBF1-214ENST00000486311 CYP46A1Q9Y6A2 500 aa25.39■■□□□ 1.66
SREBF1-214ENST00000486311 MRPL42Q9Y6G3 142 aaKnown RBP25.39■■□□□ 1.66
SREBF1-214ENST00000486311 RPS6KA5O75582 802 aa25.38■■□□□ 1.65
SREBF1-214ENST00000486311 USP11P51784 963 aa25.38■■□□□ 1.65
SREBF1-214ENST00000486311 NFX1Q12986 1120 aaKnown RBP25.38■■□□□ 1.65
SREBF1-214ENST00000486311 PUS10Q3MIT2 529 aaKnown RBP25.38■■□□□ 1.65
SREBF1-214ENST00000486311 TRIM22Q8IYM9 498 aa25.38■■□□□ 1.65
SREBF1-214ENST00000486311 TMEM40Q8WWA1 233 aa25.38■■□□□ 1.65
SREBF1-214ENST00000486311 C1QTNF1Q9BXJ1 281 aa25.38■■□□□ 1.65
SREBF1-214ENST00000486311 TM6SF1Q9BZW5 370 aa25.38■■□□□ 1.65
SREBF1-214ENST00000486311 CEP131Q9UPN4 1083 aa25.38■■□□□ 1.65
SREBF1-214ENST00000486311 WDR64B1ANS9 1081 aa25.37■■□□□ 1.65
SREBF1-214ENST00000486311 MSH4O15457 936 aa25.37■■□□□ 1.65
SREBF1-214ENST00000486311 NLRP5P59047 1200 aa25.37■■□□□ 1.65
SREBF1-214ENST00000486311 PTCRAQ6ISU1 281 aaPredicted RBP25.37■■□□□ 1.65
SREBF1-214ENST00000486311 ZNF274Q96GC6 653 aaPredicted RBP25.37■■□□□ 1.65
SREBF1-214ENST00000486311 NCK2O43639 380 aa25.36■■□□□ 1.65
SREBF1-214ENST00000486311 SARSP49591 514 aaKnown RBP25.36■■□□□ 1.65
SREBF1-214ENST00000486311 CRYBB1P53674 252 aaPredicted RBP25.36■■□□□ 1.65
SREBF1-214ENST00000486311 SSRP1Q08945 709 aaKnown RBP25.36■■□□□ 1.65
SREBF1-214ENST00000486311 ODR4Q5SWX8 454 aa25.36■■□□□ 1.65
SREBF1-214ENST00000486311 P2RX5Q93086 422 aa25.36■■□□□ 1.65
SREBF1-214ENST00000486311 FAM167AQ96KS9 214 aa25.36■■□□□ 1.65
SREBF1-214ENST00000486311 RIT2Q99578 217 aa25.36■■□□□ 1.65
SREBF1-214ENST00000486311 LRFN2Q9ULH4 789 aa25.36■■□□□ 1.65
SREBF1-214ENST00000486311 PCDHA4Q9UN74 947 aa25.36■■□□□ 1.65
SREBF1-214ENST00000486311 ST3GAL5Q9UNP4 418 aa25.36■■□□□ 1.65
SREBF1-214ENST00000486311 SAMM50Q9Y512 469 aa25.36■■□□□ 1.65
SREBF1-214ENST00000486311 GRXCR2A6NFK2 248 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 H3BQ06 376 aaPredicted RBP25.35■■□□□ 1.65
SREBF1-214ENST00000486311 GPR182O15218 404 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 MGEA5O60502 916 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 MMP1P03956 469 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 IL9P15248 144 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 KIZQ2M2Z5 673 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 NAALADL2Q58DX5 795 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 FAM178BQ8IXR5 827 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 METTL13Q8N6R0 699 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 SLC5A5Q92911 643 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 C22orf23Q9BZE7 217 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 EPHX3Q9H6B9 360 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 CD320Q9NPF0 282 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 DISC1Q9NRI5 854 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 PLAGL2Q9UPG8 496 aa25.35■■□□□ 1.65
SREBF1-214ENST00000486311 RALGAPA2Q2PPJ7 1873 aa25.34■■□□□ 1.65
SREBF1-214ENST00000486311 CPLX1O14810 134 aa25.34■■□□□ 1.65
SREBF1-214ENST00000486311 MAGEB2O15479 319 aa25.34■■□□□ 1.65
SREBF1-214ENST00000486311 GPR32O75388 356 aa25.34■■□□□ 1.65
SREBF1-214ENST00000486311 DEXIO95424 95 aa25.34■■□□□ 1.65
SREBF1-214ENST00000486311 PAN2Q504Q3 1202 aaKnown RBP25.34■■□□□ 1.65
SREBF1-214ENST00000486311 TRMT1LQ7Z2T5 733 aaKnown RBP25.34■■□□□ 1.65
SREBF1-214ENST00000486311 FAM177A1Q8N128 213 aaPredicted RBP25.34■■□□□ 1.65
SREBF1-214ENST00000486311 TBCKQ8TEA7 893 aa25.34■■□□□ 1.65
SREBF1-214ENST00000486311 OSMRQ99650 979 aa25.34■■□□□ 1.65
SREBF1-214ENST00000486311 UPF3BQ9BZI7 483 aaKnown RBP25.34■■□□□ 1.65
SREBF1-214ENST00000486311 ALG13Q9NP73 1137 aaKnown RBP25.34■■□□□ 1.65
SREBF1-214ENST00000486311 RGS18Q9NS28 235 aa25.34■■□□□ 1.65
SREBF1-214ENST00000486311 C1orf112Q9NSG2 853 aa25.34■■□□□ 1.65
SREBF1-214ENST00000486311 ZNF862O60290 1169 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 GAS7O60861 476 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 VTNP04004 478 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 SFNP31947 248 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 GATMP50440 423 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 CAMK1Q14012 370 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 CTC1Q2NKJ3 1217 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 Q4G0T1 1027 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 SLC24A5Q71RS6 500 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 FAM228AQ86W67 206 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 LINC01465Q8N7H1 131 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 PPP1R16BQ96T49 567 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 ADAM2Q99965 735 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 RNF216Q9NWF9 866 aaPredicted RBP25.33■■□□□ 1.65
SREBF1-214ENST00000486311 CLDND1Q9NY35 253 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 PCDHB7Q9Y5E2 793 aa25.33■■□□□ 1.65
SREBF1-214ENST00000486311 DENND3A2RUS2 1198 aa25.32■■□□□ 1.64
SREBF1-214ENST00000486311 M0R2N6 131 aa25.32■■□□□ 1.64
SREBF1-214ENST00000486311 OATP04181 439 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms