RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 NT5C1BQ96P26 610 aa9.4□□□□□ -0.91
GABRE-209ENST00000486255 SPTLC3Q9NUV7 552 aa9.4□□□□□ -0.91
GABRE-209ENST00000486255 ADA2Q9NZK5 511 aa9.4□□□□□ -0.91
GABRE-209ENST00000486255 ADAM21Q9UKJ8 722 aa9.4□□□□□ -0.91
GABRE-209ENST00000486255 COL4A3BPQ9Y5P4 624 aa9.4□□□□□ -0.91
GABRE-209ENST00000486255 EIF4A1P60842 406 aaKnown RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 TIMM10P62072 90 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 PPP2R2AP63151 447 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 GRIN1Q05586 938 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 XKR9Q5GH70 373 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 FAM47AQ5JRC9 791 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 GAS2L3Q86XJ1 694 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 DBNDD2Q9BQY9 259 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 TM6SF1Q9BZW5 370 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 NSFL1CQ9UNZ2 370 aaKnown RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 INPP5FQ9Y2H2 1132 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 H0YC42 278 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 EYA2O00167 538 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 PSMC2P35998 433 aaKnown RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 MAP3K10Q02779 954 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 TAF1BQ53T94 588 aaPredicted RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 ARHGEF16Q5VV41 709 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 PPP1R2P3Q6NXS1 205 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 TTLL7Q6ZT98 887 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 DHX38Q92620 1227 aaKnown RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 PANX2Q96RD6 677 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 MAN1B1Q9UKM7 699 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 KIF13AQ9H1H9 1805 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 SEC24DO94855 1032 aaPredicted RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 TSPY1Q01534 308 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 PPARAQ07869 468 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 TMEM154Q6P9G4 183 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 ZNF790Q6PG37 636 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 B4GALNT2Q8NHY0 566 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 SLC26A7Q8TE54 656 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 DDX17Q92841 729 aaKnown RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 TEKT3Q9BXF9 490 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 SAYSD1Q9NPB0 183 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 DNAJC17Q9NVM6 304 aaKnown RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 ZNF532Q9HCE3 1301 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 TLR3O15455 904 aaKnown RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 ZNF658Q5TYW1 1059 aaPredicted RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 TPTE2Q6XPS3 522 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 RFX8Q6ZV50 586 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 TAGAPQ8N103 731 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 DHTKD1Q96HY7 919 aaPredicted RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 TGS1Q96RS0 853 aaKnown RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 GTSE1Q9NYZ3 720 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 PCDHA12Q9UN75 941 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 RGS12O14924 1447 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 TNS3Q68CZ2 1445 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 ENO4A6NNW6 628 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 KPNA7A9QM74 516 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 ERVV-2B6SEH9 535 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 PPP6R2O75170 966 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 S100A5P33763 92 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 NSUN2Q08J23 767 aaKnown RBP eCLIP9.39□□□□□ -0.91
GABRE-209ENST00000486255 KCNA1Q09470 495 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 CYTH1Q15438 398 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 KRT24Q2M2I5 525 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 BBS9Q3SYG4 887 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 PATL1Q86TB9 770 aaKnown RBP9.39□□□□□ -0.91
GABRE-209ENST00000486255 ZNF654Q8IZM8 581 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 KBTBD3Q8NAB2 608 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 NFATC2IPQ8NCF5 419 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 FAF2Q96CS3 445 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 FTOQ9C0B1 505 aaKnown RBP eCLIP9.39□□□□□ -0.91
GABRE-209ENST00000486255 SEPT3Q9UH03 358 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 CD163L1Q9NR16 1453 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 MAST3O60307 1309 aa9.39□□□□□ -0.91
GABRE-209ENST00000486255 HADHAP40939 763 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 ALKBH8Q96BT7 664 aaKnown RBP9.38□□□□□ -0.91
GABRE-209ENST00000486255 ANKRD36BP1Q96IX9 119 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 ZSCAN10Q96SZ4 725 aaPredicted RBP9.38□□□□□ -0.91
GABRE-209ENST00000486255 ADGRB2O60241 1585 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 RASA4BC9J798 803 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 RASA4O43374 803 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 ADCY3O60266 1144 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 SORBS3O60504 671 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 HSPD1P10809 573 aaKnown RBP9.38□□□□□ -0.91
GABRE-209ENST00000486255 EIF4A3P38919 411 aaKnown RBP9.38□□□□□ -0.91
GABRE-209ENST00000486255 ARHGEF6Q15052 776 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 ACBD5Q5T8D3 534 aaPredicted RBP9.38□□□□□ -0.91
GABRE-209ENST00000486255 KRT39Q6A163 491 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 FAM47EQ6ZV65 393 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 FRA10AC1Q70Z53 315 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 ZNF555Q8NEP9 628 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 P2RX5Q93086 422 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 CCDC127Q96BQ5 260 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 TTC25Q96NG3 672 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 PKD2L2Q9NZM6 624 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 FRMPD2Q68DX3 1309 aaPredicted RBP9.38□□□□□ -0.91
GABRE-209ENST00000486255 GFPT2O94808 682 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 PTPREP23469 700 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 ARL4AP40617 200 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 EPHB1P54762 984 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 LRRC8EQ6NSJ5 796 aa9.38□□□□□ -0.91
GABRE-209ENST00000486255 SPATA5Q8NB90 893 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms