RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
PTCD1-205ENST00000485746 FAM117BQ6P1L5 589 aa14.06□□□□□ -0.16
PTCD1-205ENST00000485746 HERC6Q8IVU3 1022 aa14.06□□□□□ -0.16
PTCD1-205ENST00000485746 MYOCDQ8IZQ8 938 aa14.06□□□□□ -0.16
PTCD1-205ENST00000485746 MAP7D2Q96T17 732 aa14.06□□□□□ -0.16
PTCD1-205ENST00000485746 SUGCTQ9HAC7 445 aa14.06□□□□□ -0.16
PTCD1-205ENST00000485746 PCDHA12Q9UN75 941 aa14.06□□□□□ -0.16
PTCD1-205ENST00000485746 AKT3Q9Y243 479 aa14.06□□□□□ -0.16
PTCD1-205ENST00000485746 IGSF9BQ9UPX0 1349 aa14.06□□□□□ -0.16
PTCD1-205ENST00000485746 EML1O00423 815 aa14.05□□□□□ -0.16
PTCD1-205ENST00000485746 ZNF862O60290 1169 aa14.05□□□□□ -0.16
PTCD1-205ENST00000485746 P4HBP07237 508 aaKnown RBP14.05□□□□□ -0.16
PTCD1-205ENST00000485746 MYOGP15173 224 aa14.05□□□□□ -0.16
PTCD1-205ENST00000485746 QARSP47897 775 aaKnown RBP14.05□□□□□ -0.16
PTCD1-205ENST00000485746 MGAT3Q09327 533 aa14.05□□□□□ -0.16
PTCD1-205ENST00000485746 EPHA7Q15375 998 aa14.05□□□□□ -0.16
PTCD1-205ENST00000485746 ZNF174Q15697 407 aa14.05□□□□□ -0.16
PTCD1-205ENST00000485746 TCTN1Q2MV58 587 aa14.05□□□□□ -0.16
PTCD1-205ENST00000485746 EFCAB12Q6NXP0 572 aa14.05□□□□□ -0.16
PTCD1-205ENST00000485746 HAS1Q92839 578 aa14.05□□□□□ -0.16
PTCD1-205ENST00000485746 SCLT1Q96NL6 688 aa14.05□□□□□ -0.16
PTCD1-205ENST00000485746 PPP1R16BQ96T49 567 aa14.05□□□□□ -0.16
PTCD1-205ENST00000485746 CELF4Q9BZC1 486 aaKnown RBP14.05□□□□□ -0.16
PTCD1-205ENST00000485746 TTYH1Q9H313 450 aaPredicted RBP14.05□□□□□ -0.16
PTCD1-205ENST00000485746 YBX2Q9Y2T7 364 aaKnown RBP14.05□□□□□ -0.16
PTCD1-205ENST00000485746 UPP2O95045 317 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 C22orf31O95567 290 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 VTNP04004 478 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 DNM2P50570 870 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 CLCN3P51790 818 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 DEFB103AP81534 67 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 PAK2Q13177 524 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 LPIN1Q14693 890 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 FBXO47Q5MNV8 452 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 TTC38Q5R3I4 469 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 ODR4Q5SWX8 454 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.04□□□□□ -0.16
PTCD1-205ENST00000485746 TSHZ1Q6ZSZ6 1077 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 OTUD6AQ7L8S5 288 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 NOSTRINQ8IVI9 506 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 TPH2Q8IWU9 490 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 KIAA0319LQ8IZA0 1049 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 USP38Q8NB14 1042 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 DYDC2Q96IM9 177 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 CDX2Q99626 313 aaPredicted RBP14.04□□□□□ -0.16
PTCD1-205ENST00000485746 OSBPL7Q9BZF2 842 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 TTC12Q9H892 705 aaPredicted RBP14.04□□□□□ -0.16
PTCD1-205ENST00000485746 VAV3Q9UKW4 847 aa14.04□□□□□ -0.16
PTCD1-205ENST00000485746 ZBTB42B2RXF5 422 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 CA3P07451 260 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 IBSPP21815 317 aaPredicted RBP14.03□□□□□ -0.16
PTCD1-205ENST00000485746 CD52P31358 61 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 NFX1Q12986 1120 aaKnown RBP14.03□□□□□ -0.16
PTCD1-205ENST00000485746 GRIN2CQ14957 1233 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 KIZQ2M2Z5 673 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 B3GNT9Q6UX72 402 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 TMCO2Q7Z6W1 182 aaPredicted RBP14.03□□□□□ -0.16
PTCD1-205ENST00000485746 LRRC71Q8N4P6 559 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 MYLIPQ8WY64 445 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 CEP170P1Q96L14 293 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 CCDC43Q96MW1 224 aaKnown RBP14.03□□□□□ -0.16
PTCD1-205ENST00000485746 GAS2L1Q99501 681 aaPredicted RBP14.03□□□□□ -0.16
PTCD1-205ENST00000485746 RAD9AQ99638 391 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 SH2D3AQ9BRG2 576 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 NIFKQ9BYG3 293 aaKnown RBP14.03□□□□□ -0.16
PTCD1-205ENST00000485746 RGL1Q9NZL6 768 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 SQORQ9Y6N5 450 aa14.03□□□□□ -0.16
PTCD1-205ENST00000485746 TMEM150BA6NC51 233 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 RBAK-RBAKDNI3L0D1 243 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 WNT7AO00755 349 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 RPS6KA5O75582 802 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 TRAPPC10P48553 1259 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 CYP4A11Q02928 519 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 CTTNQ14247 550 aaKnown RBP14.02□□□□□ -0.17
PTCD1-205ENST00000485746 TMEM266Q2M3C6 531 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 LARP1BQ659C4 914 aaKnown RBP14.02□□□□□ -0.17
PTCD1-205ENST00000485746 EXOC8Q8IYI6 725 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 GUCD1Q96NT3 240 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 EIF2AK1Q9BQI3 630 aaKnown RBP14.02□□□□□ -0.17
PTCD1-205ENST00000485746 JPH2Q9BR39 696 aaPredicted RBP14.02□□□□□ -0.17
PTCD1-205ENST00000485746 LXNQ9BS40 222 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 ZSWIM4Q9H7M6 989 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 STXBP5LQ9Y2K9 1186 aa14.02□□□□□ -0.17
PTCD1-205ENST00000485746 GPR182O15218 404 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 GJB5O95377 273 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 OR52Z1P0C646 297 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 FOSL2P15408 326 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 IGFBP4P22692 258 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 TECP42680 631 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 CRYBB1P53674 252 aaPredicted RBP14.01□□□□□ -0.17
PTCD1-205ENST00000485746 NLRP11P59045 1033 aaKnown RBP14.01□□□□□ -0.17
PTCD1-205ENST00000485746 ORC2Q13416 577 aaPredicted RBP14.01□□□□□ -0.17
PTCD1-205ENST00000485746 XKR9Q5GH70 373 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 PLA2G4FQ68DD2 849 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 ZNF710Q8N1W2 664 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 ERMNQ8TAM6 284 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 NLRP7Q8WX94 980 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 ZNF668Q96K58 619 aaPredicted RBP14.01□□□□□ -0.17
PTCD1-205ENST00000485746 MTMR9Q96QG7 549 aa14.01□□□□□ -0.17
PTCD1-205ENST00000485746 YME1L1Q96TA2 773 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms