RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 AK8Q96MA6 479 aa17.33■□□□□ 0.36
RPUSD3-217ENST00000485705 PNMA5Q96PV4 448 aa17.33■□□□□ 0.36
RPUSD3-217ENST00000485705 CEP89Q96ST8 783 aa17.33■□□□□ 0.36
RPUSD3-217ENST00000485705 PLIN2Q99541 437 aa17.33■□□□□ 0.36
RPUSD3-217ENST00000485705 NIFKQ9BYG3 293 aaKnown RBP17.33■□□□□ 0.36
RPUSD3-217ENST00000485705 GDPD2Q9HCC8 539 aa17.33■□□□□ 0.36
RPUSD3-217ENST00000485705 TRIM43BA6NCK2 446 aa17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 GNAT1P11488 350 aa17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 RUFY4Q6ZNE9 571 aa17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 KCNK18Q7Z418 384 aa17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 CABP7Q86V35 215 aa17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 KCNG4Q8TDN1 519 aa17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 TRIM43Q96BQ3 446 aaPredicted RBP17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 PRDM5Q9NQX1 630 aaPredicted RBP17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 TMEM39AQ9NV64 488 aa17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 TUBE1Q9UJT0 475 aa17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 TBX21Q9UL17 535 aa17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 KIAA1024Q9UPX6 916 aa17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 NOD1Q9Y239 953 aa17.32■□□□□ 0.36
RPUSD3-217ENST00000485705 LOXHD1Q8IVV2 1947 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 COL1A2P08123 1366 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 MBLAC1A4D2B0 266 aaPredicted RBP17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 SYN1P17600 705 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 ITGB8P26012 769 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 KLRC1P26715 233 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 GRB10Q13322 594 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 XKR9Q5GH70 373 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 AXDND1Q5T1B0 1012 aaPredicted RBP17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 MTHFD1LQ6UB35 978 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 SERINC5Q86VE9 423 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 SYMPKQ92797 1274 aaKnown RBP17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 TNPO1Q92973 898 aaKnown RBP17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 SPATA32Q96LK8 384 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 CYP26B1Q9NR63 512 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 DDX19AQ9NUU7 478 aaKnown RBP17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 ZMYND8Q9ULU4 1186 aaPredicted RBP17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 PCDHA7Q9UN72 937 aa17.31■□□□□ 0.36
RPUSD3-217ENST00000485705 TET1Q8NFU7 2136 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 SCN5AQ14524 2016 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 UMODL1Q5DID0 1318 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 KIAA0355O15063 1070 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 CUTAO60888 179 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 C22orf31O95567 290 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 UBA7P41226 1012 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 ME1P48163 572 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 PTK7Q13308 1070 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 KARSQ15046 597 aaKnown RBP17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 TRIM71Q2Q1W2 868 aaKnown RBP17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 HYIQ5T013 277 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 SHC4Q6S5L8 630 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 LRRC15Q8TF66 581 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 CEP170P1Q96L14 293 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 NACC1Q96RE7 527 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 PPP1R12CQ9BZL4 782 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 CCSER1Q9C0I3 900 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 STK24Q9Y6E0 443 aa17.3■□□□□ 0.36
RPUSD3-217ENST00000485705 E9PMD0 336 aa17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 MUTP22033 750 aa17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 RARRES1P49788 294 aa17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 MLLT1Q03111 559 aaPredicted RBP17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 TMEM119Q4V9L6 283 aa17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 OTUD6AQ7L8S5 288 aa17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 LRRC71Q8N4P6 559 aa17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 DNAJB3Q8WWF6 145 aa17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 NOC4LQ9BVI4 516 aaKnown RBP17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 FAM49AQ9H0Q0 323 aaPredicted RBP17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 BMP2KQ9NSY1 1161 aaPredicted RBP17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 ANKEF1Q9NU02 776 aa17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 PCDHA2Q9Y5H9 948 aa17.29■□□□□ 0.36
RPUSD3-217ENST00000485705 LTBP2Q14767 1821 aa17.28■□□□□ 0.36
RPUSD3-217ENST00000485705 KDM3AQ9Y4C1 1321 aa17.28■□□□□ 0.36
RPUSD3-217ENST00000485705 XRCC6P12956 609 aaKnown RBP eCLIP17.28■□□□□ 0.36
RPUSD3-217ENST00000485705 CYP2C18P33260 490 aa17.28■□□□□ 0.36
RPUSD3-217ENST00000485705 TBC1D8BQ0IIM8 1120 aa17.28■□□□□ 0.36
RPUSD3-217ENST00000485705 METTL13Q8N6R0 699 aa17.28■□□□□ 0.36
RPUSD3-217ENST00000485705 SCAND2PQ9GZW5 306 aaPredicted RBP17.28■□□□□ 0.36
RPUSD3-217ENST00000485705 HIPK3Q9H422 1215 aa17.28■□□□□ 0.36
RPUSD3-217ENST00000485705 NR2E3Q9Y5X4 410 aa17.28■□□□□ 0.36
RPUSD3-217ENST00000485705 A0A087X0B3 334 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 SMIM35A0A1B0GVV1 85 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 MAGEB2O15479 319 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 MAFO75444 373 aaPredicted RBP17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 CKBP12277 381 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 PLCG1P19174 1290 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 THPOP40225 353 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 CLCN3P51790 818 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 DRP2Q13474 957 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 EFCAB12Q6NXP0 572 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 KIAA0319LQ8IZA0 1049 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 LINC01465Q8N7H1 131 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 CALML4Q96GE6 196 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 CDK5RAP3Q96JB5 506 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 PANK2Q9BZ23 570 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 WNT8AQ9H1J5 351 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 BHMT2Q9H2M3 363 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 DHX33Q9H6R0 707 aaKnown RBP17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 SUGCTQ9HAC7 445 aa17.27■□□□□ 0.36
RPUSD3-217ENST00000485705 DBR1Q9UK59 544 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms