RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, human

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-213	ENST00000485530	QARS	P47897	775 aa	Known RBP	13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	MRPS5	P82675	430 aa	Known RBP	13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	GDF6	Q6KF10	455 aa	Predicted RBP	13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	NFRKB	Q6P4R8	1299 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	ANO5	Q75V66	913 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	TPH2	Q8IWU9	490 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	LRRC15	Q8TF66	581 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	LEO1	Q8WVC0	666 aa	Predicted RBP	13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	TRAPPC12	Q8WVT3	735 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	EPSTI1	Q96J88	318 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	CEP89	Q96ST8	783 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	2e-11	■□□□□ 8.7
TRA2B-213	ENST00000485530	SH2D3A	Q9BRG2	576 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	PBX4	Q9BYU1	374 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	PRDM12	Q9H4Q4	367 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	AZI2	Q9H6S1	392 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	GDPD2	Q9HCC8	539 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	TRMT13	Q9NUP7	481 aa	Known RBP	13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	TMEM39A	Q9NV64	488 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	CEP131	Q9UPN4	1083 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	POTEB3	A0JP26	581 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	PPP6R2	O75170	966 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	CD4	P01730	458 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	RPA1	P27694	616 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	PSMC5	P62195	406 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	FAAP100	Q0VG06	881 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	ADGRE1	Q14246	886 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	STK38	Q15208	465 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	FAM160B1	Q5W0V3	765 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	POTEB	Q6S5H4	581 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	ANKRD33	Q7Z3H0	272 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	SESTD1	Q86VW0	696 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	FAM126B	Q8IXS8	530 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	ATP8B4	Q8TF62	1192 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	TNPO1	Q92973	898 aa	Known RBP	13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	PNMA5	Q96PV4	448 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	LXN	Q9BS40	222 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	CHD7	Q9P2D1	2997 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	GTF2IRD1	Q9UHL9	959 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	CFAP45	Q9UL16	551 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	PCDHA7	Q9UN72	937 aa		13.71	□□□□□ -0.21
TRA2B-213	ENST00000485530	SCN10A	Q9Y5Y9	1956 aa		13.71	□□□□□ -0.22
TRA2B-213	ENST00000485530	DDX11L8	A8MPP1	907 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	TREH	O43280	583 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	B4GALT4	O60513	344 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	LYPLA2	O95372	231 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	SLC26A2	P50443	739 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	NPEPPS	P55786	919 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	PRKCE	Q02156	737 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	GRB10	Q13322	594 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	TARBP2	Q15633	366 aa	Known RBP	13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	TMEM266	Q2M3C6	531 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	RASIP1	Q5U651	963 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	SHC4	Q6S5L8	630 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	KCNK18	Q7Z418	384 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	C4orf19	Q8IY42	314 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	C7orf31	Q8N865	590 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	KRI1	Q8N9T8	703 aa	Known RBP	13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	PIGO	Q8TEQ8	1089 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	LMBR1	Q8WVP7	490 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	WNT8B	Q93098	351 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	KATNAL1	Q9BW62	490 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	NIFK	Q9BYG3	293 aa	Known RBP	13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	ZSWIM4	Q9H7M6	989 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	TCEAL9	Q9UHQ7	104 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530	REV3L	O60673	3130 aa		13.7	□□□□□ -0.22
TRA2B-213	ENST00000485530		A0A087X0B3	334 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	GRXCR1	A8MXD5	290 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	HBP1	O60381	514 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	OAT	P04181	439 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	LONP1	P36776	959 aa	Known RBP	13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	CCT6A	P40227	531 aa	Known RBP	13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	KRT85	P78386	507 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	PTPN11	Q06124	597 aa	Predicted RBP	13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	GRIK4	Q16099	956 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	XKR3	Q5GH77	459 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	FAM47C	Q5HY64	1035 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	PLA2G4F	Q68DD2	849 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	POTEG	Q6S5H5	508 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	CKAP2L	Q8IYA6	745 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	BBX	Q8WY36	941 aa	Predicted RBP	13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	DHX38	Q92620	1227 aa	Known RBP	13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	ATP6V0A1	Q93050	837 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	TOX2	Q96NM4	488 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	PLIN2	Q99541	437 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	TUFT1	Q9NNX1	390 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	TBX21	Q9UL17	535 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	ZNF215	Q9UL58	517 aa	Predicted RBP	13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	TRPC6	Q9Y210	931 aa		13.69	□□□□□ -0.22
TRA2B-213	ENST00000485530	NRCAM	Q92823	1304 aa		13.68	□□□□□ -0.22
TRA2B-213	ENST00000485530	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.68	□□□□□ -0.22
TRA2B-213	ENST00000485530	TIMP1	P01033	207 aa		13.68	□□□□□ -0.22
TRA2B-213	ENST00000485530	CYP2C9	P11712	490 aa		13.68	□□□□□ -0.22
TRA2B-213	ENST00000485530	NCL	P19338	710 aa	Known RBP	13.68	□□□□□ -0.22
TRA2B-213	ENST00000485530	KLRC1	P26715	233 aa		13.68	□□□□□ -0.22
TRA2B-213	ENST00000485530	YWHAB	P31946	246 aa	Known RBP	13.68	□□□□□ -0.22
TRA2B-213	ENST00000485530	IGBP1	P78318	339 aa		13.68	□□□□□ -0.22
TRA2B-213	ENST00000485530	PPFIA1	Q13136	1202 aa		13.68	□□□□□ -0.22
TRA2B-213	ENST00000485530	MKRN4P	Q13434	485 aa	Predicted RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms