RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SMIM35A0A1B0GVV1 85 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.84□□□□□ -0.19
MSH5-216ENST00000484309 TMEM150BA6NC51 233 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 M0QZ92 97 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 RFXAPO00287 272 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 EML1O00423 815 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 WNT7AO00755 349 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 MARCH6O60337 910 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 GJB5O95377 273 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 C22orf31O95567 290 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 OATP04181 439 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 CD52P31358 61 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 SFNP31947 248 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 TAP1Q03518 808 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 ADGRE1Q14246 886 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 RABEP1Q15276 862 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 IER5Q5VY09 327 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 METTL13Q8N6R0 699 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 BANK1Q8NDB2 785 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 PPM1EQ8WY54 764 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 FAM167AQ96KS9 214 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 SH2D3AQ9BRG2 576 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 AGO3Q9H9G7 860 aaKnown RBP13.84□□□□□ -0.19
MSH5-216ENST00000484309 UPF2Q9HAU5 1272 aaKnown RBP13.84□□□□□ -0.19
MSH5-216ENST00000484309 MTUS1Q9ULD2 1270 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 EPOPA6NHQ4 379 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 CD2BP2O95400 341 aaKnown RBP13.83□□□□□ -0.2
MSH5-216ENST00000484309 VTNP04004 478 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 GCFC2P16383 781 aaKnown RBP13.83□□□□□ -0.2
MSH5-216ENST00000484309 ATP2B1P20020 1258 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 IGFBP4P22692 258 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 CLCN3P51790 818 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 TMEM266Q2M3C6 531 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 PPP4R3AQ6IN85 833 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 B3GNT9Q6UX72 402 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 TSHZ1Q6ZSZ6 1077 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 KIAA0319LQ8IZA0 1049 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 LRRC71Q8N4P6 559 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 SLC17A8Q8NDX2 589 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 ARNTL2Q8WYA1 636 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 HAS1Q92839 578 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 APBB2Q92870 758 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 C8orf76Q96K31 380 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 LLPHQ9BRT6 129 aaKnown RBP13.83□□□□□ -0.2
MSH5-216ENST00000484309 CELF4Q9BZC1 486 aaKnown RBP13.83□□□□□ -0.2
MSH5-216ENST00000484309 CDHR5Q9HBB8 845 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 KCNMB3Q9NPA1 279 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 SH2B1Q9NRF2 756 aaPredicted RBP13.83□□□□□ -0.2
MSH5-216ENST00000484309 CHD7Q9P2D1 2997 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 SEPT9Q9UHD8 586 aaPredicted RBP13.83□□□□□ -0.2
MSH5-216ENST00000484309 VAV3Q9UKW4 847 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 ATG2AQ2TAZ0 1938 aa13.83□□□□□ -0.2
MSH5-216ENST00000484309 IBSPP21815 317 aaPredicted RBP13.82□□□□□ -0.2
MSH5-216ENST00000484309 MTERF2Q49AM1 385 aa13.82□□□□□ -0.2
MSH5-216ENST00000484309 NCAPH2Q6IBW4 605 aa13.82□□□□□ -0.2
MSH5-216ENST00000484309 RDM1Q8NG50 284 aa13.82□□□□□ -0.2
MSH5-216ENST00000484309 ZNF668Q96K58 619 aaPredicted RBP13.82□□□□□ -0.2
MSH5-216ENST00000484309 RAD9AQ99638 391 aa13.82□□□□□ -0.2
MSH5-216ENST00000484309 NAP1L4Q99733 375 aaKnown RBP13.82□□□□□ -0.2
MSH5-216ENST00000484309 NRBP2Q9NSY0 501 aa13.82□□□□□ -0.2
MSH5-216ENST00000484309 CEP131Q9UPN4 1083 aa13.82□□□□□ -0.2
MSH5-216ENST00000484309 FNDC1Q4ZHG4 1894 aaPredicted RBP13.82□□□□□ -0.2
MSH5-216ENST00000484309 ST18O60284 1047 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 RPLP2P05387 115 aaKnown RBP13.81□□□□□ -0.2
MSH5-216ENST00000484309 PAK2Q13177 524 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 PPP2R5CQ13362 524 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 SAFBQ15424 915 aaKnown RBP eCLIP13.81□□□□□ -0.2
MSH5-216ENST00000484309 CCDC85BQ15834 202 aaPredicted RBP13.81□□□□□ -0.2
MSH5-216ENST00000484309 KIZQ2M2Z5 673 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 PLA2G4FQ68DD2 849 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 EFCAB12Q6NXP0 572 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 MICALL1Q8N3F8 863 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 USP38Q8NB14 1042 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 FAM184AQ8NB25 1140 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 TMEM40Q8WWA1 233 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 LINC01599Q8WXQ3 324 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 FAM20AQ96MK3 541 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 OSMRQ99650 979 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 SUGCTQ9HAC7 445 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 PADI3Q9ULW8 664 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 AKT3Q9Y243 479 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 COL4A6Q14031 1691 aa13.81□□□□□ -0.2
MSH5-216ENST00000484309 LINC01553A4QN01 128 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 DDX11L8A8MPP1 907 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 STBD1O95210 358 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 HMGN5P82970 282 aaKnown RBP13.8□□□□□ -0.2
MSH5-216ENST00000484309 TBC1D8BQ0IIM8 1120 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 NFX1Q12986 1120 aaKnown RBP13.8□□□□□ -0.2
MSH5-216ENST00000484309 CALCRLQ16602 461 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 NME8Q8N427 588 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 GDPD5Q8WTR4 605 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 TOP1MTQ969P6 601 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 TBC1D32Q96NH3 1257 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 MAP7D2Q96T17 732 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 YME1L1Q96TA2 773 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 WRAP73Q9P2S5 460 aaPredicted RBP13.8□□□□□ -0.2
MSH5-216ENST00000484309 NOC2LQ9Y3T9 749 aaKnown RBP13.8□□□□□ -0.2
MSH5-216ENST00000484309 KDM3AQ9Y4C1 1321 aa13.8□□□□□ -0.2
MSH5-216ENST00000484309 TRANK1O15050 2925 aa13.79□□□□□ -0.2
MSH5-216ENST00000484309 ENPP3O14638 875 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms