RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 ROBO1Q9Y6N7 1651 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 RBAK-RBAKDNI3L0D1 243 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 NKRFO15226 690 aaKnown RBP eCLIP12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 AKR1B10O60218 316 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 VIMP08670 466 aaKnown RBP12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 SP100P23497 879 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 KCTD19Q17RG1 926 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 ERMARDQ5T6L9 678 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 LMNTD2Q8IXW0 634 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 PHC3Q8NDX5 983 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 ZNF317Q96PQ6 595 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 ELAC2Q9BQ52 826 aaKnown RBP12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 LZTS2Q9BRK4 669 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 LRRC4CQ9HCJ2 640 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 MINPP1Q9UNW1 487 aa12.58□□□□□ -0.4
SEC61A1-205ENST00000483956 CYTH3O43739 400 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 MAGEA1P43355 309 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 LRRC63Q05C16 580 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 ITIH4Q14624 930 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 LBRQ14739 615 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 RUFY4Q6ZNE9 571 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 HEATR3Q7Z4Q2 680 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 NOX5Q96PH1 765 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 FAM129AQ9BZQ8 928 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 RMI1Q9H9A7 625 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 NKX1-2Q9UD57 310 aaPredicted RBP12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 MYH14Q7Z406 1995 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 LRRC53A6NM62 1247 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 MSH2P43246 934 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 TFAP4Q01664 338 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 SEPT2Q15019 361 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 CFAP221Q4G0U5 840 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 PIGWQ7Z7B1 504 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 GUF1Q8N442 669 aaKnown RBP12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 KIFAP3Q92845 792 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 KLHL29Q96CT2 875 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 FAM207AQ9NSI2 230 aaPredicted RBP12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 DLGAP2Q9P1A6 1054 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 TAF1P21675 1872 aa12.57□□□□□ -0.4
SEC61A1-205ENST00000483956 PALM3A6NDB9 673 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 SMAPO00193 183 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 SGSM1Q2NKQ1 1148 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 C12orf60Q5U649 245 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 KLHDC7AQ5VTJ3 777 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 PDXDC1Q6P996 788 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 UNC13DQ70J99 1090 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 LRRC34Q8IZ02 419 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 MTFR1LQ9H019 292 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 PREBQ9HCU5 417 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 STK17AQ9UEE5 414 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 SALL4Q9UJQ4 1053 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 SHBGP04278 402 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 RNASE9P60153 205 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 ATP11AP98196 1134 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 NONOQ15233 471 aaKnown RBP eCLIP12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 AGBL2Q5U5Z8 902 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 RRAGAQ7L523 313 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 LONP2Q86WA8 852 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 GPIHBP1Q8IV16 184 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 ANKRD13CQ8N6S4 541 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 MTMR8Q96EF0 704 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 DTNBP1Q96EV8 351 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 SPZ1Q9BXG8 430 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 MAF1Q9H063 256 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 SLAIN2Q9P270 581 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 TRIM33Q9UPN9 1127 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 PHF24Q9UPV7 400 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 LRRC42Q9Y546 428 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 COL14A1Q05707 1796 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 ZNF335Q9H4Z2 1342 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 GRID2IPA4D2P6 1211 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 ABLIM1O14639 778 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 RAD51CO43502 376 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 LACTBP83111 547 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 DYNC1I2Q13409 638 aaKnown RBP12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 FOXB2Q5VYV0 432 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 HGSNATQ68CP4 663 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 LRRC55Q6ZSA7 311 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 SLC17A8Q8NDX2 589 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 UBLCP1Q8WVY7 318 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 SYN2Q92777 582 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 CCDC97Q96F63 343 aaPredicted RBP12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 CALML4Q96GE6 196 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 PHACTR1Q9C0D0 580 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 MMRN2Q9H8L6 949 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 ZWILCHQ9H900 591 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 MCM9Q9NXL9 1143 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 BTG4Q9NY30 223 aa12.56□□□□□ -0.4
SEC61A1-205ENST00000483956 ASAP2O43150 1006 aa12.55□□□□□ -0.4
SEC61A1-205ENST00000483956 CCNT1O60563 726 aaKnown RBP12.55□□□□□ -0.4
SEC61A1-205ENST00000483956 SV2BQ7L1I2 683 aa12.55□□□□□ -0.4
SEC61A1-205ENST00000483956 NEK8Q86SG6 692 aa12.55□□□□□ -0.4
SEC61A1-205ENST00000483956 APLFQ8IW19 511 aaPredicted RBP12.55□□□□□ -0.4
SEC61A1-205ENST00000483956 FGD4Q96M96 766 aa12.55□□□□□ -0.4
SEC61A1-205ENST00000483956 MOV10L1Q9BXT6 1211 aaKnown RBP12.55□□□□□ -0.4
SEC61A1-205ENST00000483956 GALNT8Q9NY28 637 aa12.55□□□□□ -0.4
SEC61A1-205ENST00000483956 SAMD15Q9P1V8 674 aa12.55□□□□□ -0.4
SEC61A1-205ENST00000483956 ZNF652Q9Y2D9 606 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms