RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 POTEMA6NI47 508 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 M0QZ92 97 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 SLITRK3O94933 977 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 STBD1O95210 358 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 XRCC6P12956 609 aaKnown RBP eCLIP17.48■□□□□ 0.39
RPP40-206ENST00000483546 TMOD1P28289 359 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 TECP42680 631 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 EPHB4P54760 987 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 TBC1D8BQ0IIM8 1120 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 RESTQ13127 1097 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 LRIT3Q3SXY7 679 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 HABP4Q5JVS0 413 aaKnown RBP17.48■□□□□ 0.39
RPP40-206ENST00000483546 TMEM240Q5SV17 173 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 DTHD1Q6ZMT9 781 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 RUFY4Q6ZNE9 571 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 C16orf59Q7L2K0 433 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 FERMT3Q86UX7 667 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 DNAJB3Q8WWF6 145 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 HERVK_113Q902F9 699 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 DYDC2Q96IM9 177 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.48■□□□□ 0.39
RPP40-206ENST00000483546 POLR3CQ9BUI4 534 aaPredicted RBP17.48■□□□□ 0.39
RPP40-206ENST00000483546 SQORQ9Y6N5 450 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 TET1Q8NFU7 2136 aa17.48■□□□□ 0.39
RPP40-206ENST00000483546 KDM3AQ9Y4C1 1321 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 SIP14410 1827 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 DDX11L8A8MPP1 907 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 EFCAB14O75071 495 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 BAIAP3O94812 1187 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 YWHABP31946 246 aaKnown RBP17.47■□□□□ 0.39
RPP40-206ENST00000483546 MRPS6P82932 125 aaKnown RBP17.47■□□□□ 0.39
RPP40-206ENST00000483546 SHHQ15465 462 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 ZNF365Q70YC5 407 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 ANO5Q75V66 913 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 TPH2Q8IWU9 490 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 IGSF22Q8N9C0 903 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 USP38Q8NB14 1042 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 RNPC3Q96LT9 517 aaKnown RBP17.47■□□□□ 0.39
RPP40-206ENST00000483546 MAP7D2Q96T17 732 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 RGL1Q9NZL6 768 aa17.47■□□□□ 0.39
RPP40-206ENST00000483546 GAS2O43903 313 aaKnown RBP17.46■□□□□ 0.39
RPP40-206ENST00000483546 NBNO60934 754 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 ACRP10323 421 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 RPA1P27694 616 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 RFC5P40937 340 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 CDC42EP1Q00587 391 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 CYP4A11Q02928 519 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 MGAT3Q09327 533 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 CTTNQ14247 550 aaKnown RBP17.46■□□□□ 0.39
RPP40-206ENST00000483546 MTERF2Q49AM1 385 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 C9orf50Q5SZB4 431 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 RASIP1Q5U651 963 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 CNKSR3Q6P9H4 555 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 TRMT1LQ7Z2T5 733 aaKnown RBP17.46■□□□□ 0.39
RPP40-206ENST00000483546 DEFB128Q7Z7B8 93 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 FTOQ9C0B1 505 aaKnown RBP eCLIP17.46■□□□□ 0.39
RPP40-206ENST00000483546 FAM49AQ9H0Q0 323 aaPredicted RBP17.46■□□□□ 0.39
RPP40-206ENST00000483546 CYP26B1Q9NR63 512 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 ANKEF1Q9NU02 776 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 PCDH10Q9P2E7 1040 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 LRWD1Q9UFC0 647 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 TRPV2Q9Y5S1 764 aa17.46■□□□□ 0.39
RPP40-206ENST00000483546 IGKV6-21A0A0C4DH24 114 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 MAFO75444 373 aaPredicted RBP17.45■□□□□ 0.38
RPP40-206ENST00000483546 CHRNA1P02708 482 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 CTSHP09668 335 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 DNM2P50570 870 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 MBTPS1Q14703 1052 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 GPNMBQ14956 572 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 EFCAB12Q6NXP0 572 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 KIAA0319LQ8IZA0 1049 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 KCTD17Q8N5Z5 321 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 METTL13Q8N6R0 699 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 LINC01465Q8N7H1 131 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 SLC7A3Q8WY07 619 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 APBB2Q92870 758 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 VWCEQ96DN2 955 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 CEP89Q96ST8 783 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 WRAP73Q9P2S5 460 aaPredicted RBP17.45■□□□□ 0.38
RPP40-206ENST00000483546 CDY2AQ9Y6F7 541 aa17.45■□□□□ 0.38
RPP40-206ENST00000483546 MORC2Q9Y6X9 1032 aaPredicted RBP17.45■□□□□ 0.38
RPP40-206ENST00000483546 MICAL3Q7RTP6 2002 aa17.44■□□□□ 0.38
RPP40-206ENST00000483546 ABHD14A-ACY1A0A1B0GW23 586 aa17.44■□□□□ 0.38
RPP40-206ENST00000483546 SLC26A4O43511 780 aa17.44■□□□□ 0.38
RPP40-206ENST00000483546 SPATA31C1P0DKV0 1188 aa17.44■□□□□ 0.38
RPP40-206ENST00000483546 PLEKHG4Q58EX7 1191 aa17.44■□□□□ 0.38
RPP40-206ENST00000483546 ODR4Q5SWX8 454 aa17.44■□□□□ 0.38
RPP40-206ENST00000483546 CATSPER3Q86XQ3 398 aa17.44■□□□□ 0.38
RPP40-206ENST00000483546 SEPT8Q92599 483 aa17.44■□□□□ 0.38
RPP40-206ENST00000483546 CEP170P1Q96L14 293 aa17.44■□□□□ 0.38
RPP40-206ENST00000483546 AK8Q96MA6 479 aa17.44■□□□□ 0.38
RPP40-206ENST00000483546 CCDC43Q96MW1 224 aaKnown RBP17.44■□□□□ 0.38
RPP40-206ENST00000483546 NACC1Q96RE7 527 aa17.44■□□□□ 0.38
RPP40-206ENST00000483546 CELF4Q9BZC1 486 aaKnown RBP17.44■□□□□ 0.38
RPP40-206ENST00000483546 RANBP2P49792 3224 aaKnown RBP17.44■□□□□ 0.38
RPP40-206ENST00000483546 ZSCAN22P10073 491 aaPredicted RBP17.43■□□□□ 0.38
RPP40-206ENST00000483546 IKBKEQ14164 716 aa17.43■□□□□ 0.38
RPP40-206ENST00000483546 SF3A1Q15459 793 aaKnown RBP17.43■□□□□ 0.38
RPP40-206ENST00000483546 XKR9Q5GH70 373 aa17.43■□□□□ 0.38
RPP40-206ENST00000483546 KRT79Q5XKE5 535 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms