RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 DKC1O60832 514 aaKnown RBP eCLIP20.22■□□□□ 0.83
HDAC6-225ENST00000483506 MCM7P33993 719 aa20.22■□□□□ 0.83
HDAC6-225ENST00000483506 QARSP47897 775 aaKnown RBP20.22■□□□□ 0.83
HDAC6-225ENST00000483506 WDR5P61964 334 aaKnown RBP20.22■□□□□ 0.83
HDAC6-225ENST00000483506 TTC38Q5R3I4 469 aa20.22■□□□□ 0.83
HDAC6-225ENST00000483506 BANK1Q8NDB2 785 aa20.22■□□□□ 0.83
HDAC6-225ENST00000483506 DBF4BQ8NFT6 615 aa20.22■□□□□ 0.83
HDAC6-225ENST00000483506 APBB2Q92870 758 aa20.22■□□□□ 0.83
HDAC6-225ENST00000483506 INTS4Q96HW7 963 aaKnown RBP20.22■□□□□ 0.83
HDAC6-225ENST00000483506 PBX4Q9BYU1 374 aa20.22■□□□□ 0.83
HDAC6-225ENST00000483506 TTC12Q9H892 705 aaPredicted RBP20.22■□□□□ 0.83
HDAC6-225ENST00000483506 TRPV2Q9Y5S1 764 aa20.22■□□□□ 0.83
HDAC6-225ENST00000483506 CHD9Q3L8U1 2897 aa20.21■□□□□ 0.83
HDAC6-225ENST00000483506 GRXCR1A8MXD5 290 aa20.21■□□□□ 0.83
HDAC6-225ENST00000483506 ATP2A2P16615 1042 aaKnown RBP20.21■□□□□ 0.83
HDAC6-225ENST00000483506 ATP2B1P20020 1258 aa20.21■□□□□ 0.83
HDAC6-225ENST00000483506 DNAJB2P25686 324 aa20.21■□□□□ 0.83
HDAC6-225ENST00000483506 TOB1P50616 345 aaPredicted RBP20.21■□□□□ 0.83
HDAC6-225ENST00000483506 IKBKEQ14164 716 aa20.21■□□□□ 0.83
HDAC6-225ENST00000483506 LPIN1Q14693 890 aa20.21■□□□□ 0.83
HDAC6-225ENST00000483506 FBXO47Q5MNV8 452 aa20.21■□□□□ 0.83
HDAC6-225ENST00000483506 ANO5Q75V66 913 aa20.21■□□□□ 0.83
HDAC6-225ENST00000483506 C4orf19Q8IY42 314 aa20.21■□□□□ 0.83
HDAC6-225ENST00000483506 SEPT8Q92599 483 aa20.21■□□□□ 0.83
HDAC6-225ENST00000483506 LOXHD1Q8IVV2 1947 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 H3BQV1 296 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 K7ELQ4 463 aaPredicted RBP20.2■□□□□ 0.82
HDAC6-225ENST00000483506 OR52Z1P0C646 297 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 TXKP42681 527 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 ZNF174Q15697 407 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 RAB30Q15771 203 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 LARP1BQ659C4 914 aaKnown RBP20.2■□□□□ 0.82
HDAC6-225ENST00000483506 NCAPH2Q6IBW4 605 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 TSHZ1Q6ZSZ6 1077 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 ZNF710Q8N1W2 664 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 C4orf32Q8N8J7 132 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 USP38Q8NB14 1042 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 NEK9Q8TD19 979 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 HSD17B14Q9BPX1 270 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 LXNQ9BS40 222 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 IFIH1Q9BYX4 1025 aaKnown RBP20.2■□□□□ 0.82
HDAC6-225ENST00000483506 CELF4Q9BZC1 486 aaKnown RBP20.2■□□□□ 0.82
HDAC6-225ENST00000483506 WRAP73Q9P2S5 460 aaPredicted RBP20.2■□□□□ 0.82
HDAC6-225ENST00000483506 SEPT9Q9UHD8 586 aaPredicted RBP20.2■□□□□ 0.82
HDAC6-225ENST00000483506 PPME1Q9Y570 386 aa20.2■□□□□ 0.82
HDAC6-225ENST00000483506 IGKV6-21A0A0C4DH24 114 aa20.19■□□□□ 0.82
HDAC6-225ENST00000483506 M0QZ92 97 aa20.19■□□□□ 0.82
HDAC6-225ENST00000483506 LYPLA2O95372 231 aa20.19■□□□□ 0.82
HDAC6-225ENST00000483506 GHRP10912 638 aa20.19■□□□□ 0.82
HDAC6-225ENST00000483506 KCNJ6P48051 423 aa20.19■□□□□ 0.82
HDAC6-225ENST00000483506 ZNF697Q5TEC3 545 aa20.19■□□□□ 0.82
HDAC6-225ENST00000483506 FAM43BQ6ZT52 329 aaPredicted RBP20.19■□□□□ 0.82
HDAC6-225ENST00000483506 TRMT1LQ7Z2T5 733 aaKnown RBP20.19■□□□□ 0.82
HDAC6-225ENST00000483506 DEFB123Q8N688 67 aa20.19■□□□□ 0.82
HDAC6-225ENST00000483506 ZSWIM4Q9H7M6 989 aa20.19■□□□□ 0.82
HDAC6-225ENST00000483506 PCDHA11Q9Y5I1 949 aa20.19■□□□□ 0.82
HDAC6-225ENST00000483506 CDH23Q9H251 3354 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 SLITRK3O94933 977 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 TMOD1P28289 359 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 PBX2P40425 430 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 TBC1D8BQ0IIM8 1120 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 RILPL1Q5EBL4 403 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 MCTP1Q6DN14 999 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 EFCAB12Q6NXP0 572 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 HERC6Q8IVU3 1022 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 TIFAQ96CG3 184 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 DYDC2Q96IM9 177 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 EIF2AK1Q9BQI3 630 aaKnown RBP20.18■□□□□ 0.82
HDAC6-225ENST00000483506 RGL1Q9NZL6 768 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 ARID2Q68CP9 1835 aa20.18■□□□□ 0.82
HDAC6-225ENST00000483506 TMEM150BA6NC51 233 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 DDX11L8A8MPP1 907 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 PDCP20941 246 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 DEFB103AP81534 67 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 TMEM62Q0P6H9 643 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 NBR1Q14596 966 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 MTERF2Q49AM1 385 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 Q7L0L9 218 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 METTL13Q8N6R0 699 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 TTYH1Q9H313 450 aaPredicted RBP20.17■□□□□ 0.82
HDAC6-225ENST00000483506 AGO3Q9H9G7 860 aaKnown RBP20.17■□□□□ 0.82
HDAC6-225ENST00000483506 CYP26B1Q9NR63 512 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.17■□□□□ 0.82
HDAC6-225ENST00000483506 MTMR10Q9NXD2 777 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 MSRAQ9UJ68 235 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 YBX2Q9Y2T7 364 aaKnown RBP20.17■□□□□ 0.82
HDAC6-225ENST00000483506 PCDHB6Q9Y5E3 794 aa20.17■□□□□ 0.82
HDAC6-225ENST00000483506 POTEMA6NI47 508 aa20.16■□□□□ 0.82
HDAC6-225ENST00000483506 RBAK-RBAKDNI3L0D1 243 aa20.16■□□□□ 0.82
HDAC6-225ENST00000483506 LAD1O00515 517 aa20.16■□□□□ 0.82
HDAC6-225ENST00000483506 GPR32O75388 356 aa20.16■□□□□ 0.82
HDAC6-225ENST00000483506 MAFO75444 373 aaPredicted RBP20.16■□□□□ 0.82
HDAC6-225ENST00000483506 YWHABP31946 246 aaKnown RBP20.16■□□□□ 0.82
HDAC6-225ENST00000483506 FXR2P51116 673 aaKnown RBP eCLIP20.16■□□□□ 0.82
HDAC6-225ENST00000483506 CLCN3P51790 818 aa20.16■□□□□ 0.82
HDAC6-225ENST00000483506 MAP7D2Q96T17 732 aa20.16■□□□□ 0.82
HDAC6-225ENST00000483506 JPH2Q9BR39 696 aaPredicted RBP20.16■□□□□ 0.82
HDAC6-225ENST00000483506 SEMA6BQ9H3T3 888 aa20.16■□□□□ 0.82
HDAC6-225ENST00000483506 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-225ENST00000483506 GJB5O95377 273 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms