RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 MAP2P11137 1827 aaKnown RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 SMIM23A6NLE4 172 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 SH2B2O14492 632 aaPredicted RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 POLR2DO15514 142 aaKnown RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 SUN1O94901 812 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 OXSR1O95747 527 aaPredicted RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 ENDOUP21128 410 aaKnown RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 IL13P35225 146 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 CYLC1P35663 651 aaPredicted RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 FLIIQ13045 1269 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 PTK7Q13308 1070 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 R3HDM1Q15032 1099 aaKnown RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 TTF1Q15361 905 aaPredicted RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 CHRNA2Q15822 529 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 INAQ16352 499 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 HLFQ16534 295 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 MEA1Q16626 185 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 WDR72Q3MJ13 1102 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 CFAP221Q4G0U5 840 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 KLHL35Q6PF15 583 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 KBTBD2Q8IY47 623 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 KRI1Q8N9T8 703 aaKnown RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 LRRC59Q96AG4 307 aaKnown RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 TMEM237Q96Q45 408 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 SH3GL1Q99961 368 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 FSD1Q9BTV5 496 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 CCDC28BQ9BUN5 200 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 SLC7A5P2Q9GIP4 190 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 LRMDAQ9H2I8 198 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 METTL5Q9NRN9 209 aaKnown RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 INTS9Q9NV88 658 aaKnown RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 FGFR1OP2Q9NVK5 253 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 LARSQ9P2J5 1176 aaKnown RBP8.46□□□□□ -1.05
COL4A5-205ENST00000483338 PRELID1Q9Y255 219 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 TSC22D4Q9Y3Q8 395 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 NRXN3Q9Y4C0 1643 aa8.46□□□□□ -1.05
COL4A5-205ENST00000483338 ITSN1Q15811 1721 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 ECE2O60344 883 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 ZPR1O75312 459 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 MYBP10242 640 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 VDRP11473 427 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 RXRGP48443 463 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 CCT8P50990 548 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 MGAT5Q09328 741 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 DPYDQ12882 1025 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 GSTA3Q16772 222 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 KCTD19Q17RG1 926 aaPredicted RBP8.46□□□□□ -1.06
COL4A5-205ENST00000483338 TMEM214Q6NUQ4 689 aaKnown RBP8.46□□□□□ -1.06
COL4A5-205ENST00000483338 KRT26Q7Z3Y9 468 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 CLASRPQ8N2M8 674 aaKnown RBP8.46□□□□□ -1.06
COL4A5-205ENST00000483338 SYT2Q8N9I0 419 aaPredicted RBP8.46□□□□□ -1.06
COL4A5-205ENST00000483338 TBC1D16Q8TBP0 767 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 CEP295NLQ96MC4 621 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 SH2D4AQ9H788 454 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.46□□□□□ -1.06
COL4A5-205ENST00000483338 CLIC5Q9NZA1 410 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 FADS3Q9Y5Q0 445 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 A0A1W2PQ67 120 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 UNCXA6NJT0 531 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 OR6B1O95007 311 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 IARSP41252 1262 aaKnown RBP8.46□□□□□ -1.06
COL4A5-205ENST00000483338 GRIN1Q05586 938 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 WASHC2DQ5SRD0 308 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 GDAP1Q8TB36 358 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.46□□□□□ -1.06
COL4A5-205ENST00000483338 OLFM3Q96PB7 478 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 NACAP1Q9BZK3 213 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 DRC3Q9H069 523 aa8.46□□□□□ -1.06
COL4A5-205ENST00000483338 MAP3K19Q56UN5 1328 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 MYH6P13533 1939 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 MYO5AQ9Y4I1 1855 aaKnown RBP8.45□□□□□ -1.06
COL4A5-205ENST00000483338 O00370 1275 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 CCR3P51677 355 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 NEK3P51956 506 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 EXOSC10Q01780 885 aaKnown RBP8.45□□□□□ -1.06
COL4A5-205ENST00000483338 UBXN1Q04323 297 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 GIT2Q14161 759 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 KIF22Q14807 665 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 FXNQ16595 210 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 KHDC1Q4VXA5 237 aaKnown RBP8.45□□□□□ -1.06
COL4A5-205ENST00000483338 FNDC8Q8TC99 324 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 SH3TC2Q8TF17 1288 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 ASCC2Q9H1I8 757 aaPredicted RBP8.45□□□□□ -1.06
COL4A5-205ENST00000483338 SYNCQ9H7C4 482 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 STRN4Q9NRL3 753 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 MKS1Q9NXB0 559 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 C9orf78Q9NZ63 289 aaPredicted RBP8.45□□□□□ -1.06
COL4A5-205ENST00000483338 ARL2BPQ9Y2Y0 163 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 C1orf167Q5SNV9 1468 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 PPP1R3GB7ZBB8 358 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 BTBD19C9JJ37 291 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 GCP02774 474 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 HSPA8P11142 646 aaKnown RBP8.45□□□□□ -1.06
COL4A5-205ENST00000483338 IGBP1P78318 339 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 TBL3Q12788 808 aaKnown RBP8.45□□□□□ -1.06
COL4A5-205ENST00000483338 CYLC2Q14093 348 aaPredicted RBP8.45□□□□□ -1.06
COL4A5-205ENST00000483338 PDCD4Q53EL6 469 aaKnown RBP8.45□□□□□ -1.06
COL4A5-205ENST00000483338 CHST3Q7LGC8 479 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 CASP10Q92851 521 aa8.45□□□□□ -1.06
COL4A5-205ENST00000483338 ZNF274Q96GC6 653 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms