RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 RTN3O95197 1032 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-205ENST00000483122 KIF5BP33176 963 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 SSR1P43307 286 aaKnown RBP12.83□□□□□ -0.36
VTI1A-205ENST00000483122 SLCO1A2P46721 670 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 BCAMP50895 628 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 LACTBP83111 547 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-205ENST00000483122 ATP11AP98196 1134 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 SLC29A2Q14542 456 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 LRRC14Q15048 493 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 ASRGL1Q7L266 308 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 DAAM2Q86T65 1068 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 SLC17A8Q8NDX2 589 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 TPCN2Q8NHX9 752 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 MMTAG2Q9BU76 263 aaKnown RBP12.83□□□□□ -0.36
VTI1A-205ENST00000483122 CCDC113Q9H0I3 377 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 ZDHHC18Q9NUE0 388 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 ZMYND8Q9ULU4 1186 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-205ENST00000483122 SH3BP1Q9Y3L3 701 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 SBF2Q86WG5 1849 aa12.83□□□□□ -0.36
VTI1A-205ENST00000483122 BTNL10A8MVZ5 291 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 PDHA1P08559 390 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 PDE6CP51160 858 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 MXRA7P84157 204 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 AMPD3Q01432 767 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 PSMD2Q13200 908 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 DENND2CQ68D51 928 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 GIGYF2Q6Y7W6 1299 aaKnown RBP12.82□□□□□ -0.36
VTI1A-205ENST00000483122 ZNF571Q7Z3V5 609 aaPredicted RBP12.82□□□□□ -0.36
VTI1A-205ENST00000483122 PEX26Q7Z412 305 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 GUF1Q8N442 669 aaKnown RBP12.82□□□□□ -0.36
VTI1A-205ENST00000483122 FITM2Q8N6M3 262 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 TEX9Q8N6V9 391 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 NEK9Q8TD19 979 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 MGARPQ8TDB4 240 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 EPS8L3Q8TE67 593 aaKnown RBP12.82□□□□□ -0.36
VTI1A-205ENST00000483122 ZCWPW1Q9H0M4 648 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 PABPC3Q9H361 631 aaKnown RBP12.82□□□□□ -0.36
VTI1A-205ENST00000483122 STXBP5LQ9Y2K9 1186 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 NHSQ6T4R5 1651 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 GOLGA6L10A0A0M3HER8 536 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 CCDC169A6NNP5 214 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 TCP11X1B4DZS4 312 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 SLC5A1P13866 664 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 GNAZP19086 355 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 TECP42680 631 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
VTI1A-205ENST00000483122 ROR2Q01974 943 aaKnown RBP12.82□□□□□ -0.36
VTI1A-205ENST00000483122 PTK2Q05397 1052 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 LRRC63Q05C16 580 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 SPDYCQ5MJ68 293 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 UNC13DQ70J99 1090 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 ADAT2Q7Z6V5 191 aaKnown RBP12.82□□□□□ -0.36
VTI1A-205ENST00000483122 CNBD1Q8NA66 436 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 TEKT4Q8WW24 435 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 UTP4Q969X6 686 aaKnown RBP12.82□□□□□ -0.36
VTI1A-205ENST00000483122 SYT15Q9BQS2 421 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 AIPL1Q9NZN9 384 aa12.82□□□□□ -0.36
VTI1A-205ENST00000483122 KCPQ6ZWJ8 1503 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 LRRD1A4D1F6 860 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 ERVV-2B6SEH9 535 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 OR52Z1P0C646 297 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 PLTPP55058 493 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 KLRC3Q07444 240 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 TBC1D25Q3MII6 688 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 COL23A1Q86Y22 540 aaPredicted RBP12.81□□□□□ -0.36
VTI1A-205ENST00000483122 IFT74Q96LB3 600 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 MOV10L1Q9BXT6 1211 aaKnown RBP12.81□□□□□ -0.36
VTI1A-205ENST00000483122 BLOC1S4Q9NUP1 217 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 DBR1Q9UK59 544 aaKnown RBP12.81□□□□□ -0.36
VTI1A-205ENST00000483122 COL4A3BPQ9Y5P4 624 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 MYH3P11055 1940 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 MAGEB6P1A0A0J9YX57 407 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 IRS4O14654 1257 aaPredicted RBP12.81□□□□□ -0.36
VTI1A-205ENST00000483122 AGTP01019 485 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 FGGP02679 453 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
VTI1A-205ENST00000483122 PPP1R15BQ5SWA1 713 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 DUPD1Q68J44 220 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 SV2BQ7L1I2 683 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 RMDN2Q96LZ7 410 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 AK8Q96MA6 479 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 GANQ9H2C0 597 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 SEMA4AQ9H3S1 761 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 SNX24Q9Y343 169 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 LRRC42Q9Y546 428 aa12.81□□□□□ -0.36
VTI1A-205ENST00000483122 ARAP2Q8WZ64 1704 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 A0A1B0GVG6 124 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 SUN1O94901 812 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 GCLCP48506 637 aaPredicted RBP12.8□□□□□ -0.36
VTI1A-205ENST00000483122 RNASELQ05823 741 aaKnown RBP12.8□□□□□ -0.36
VTI1A-205ENST00000483122 ADAM9Q13443 819 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 PDCD2Q16342 344 aaPredicted RBP12.8□□□□□ -0.36
VTI1A-205ENST00000483122 ZC3H12AQ5D1E8 599 aaKnown RBP12.8□□□□□ -0.36
VTI1A-205ENST00000483122 ZDHHC24Q6UX98 284 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 NLRP10Q86W26 655 aa12.8□□□□□ -0.36
VTI1A-205ENST00000483122 DRAXINQ8NBI3 349 aaPredicted RBP12.8□□□□□ -0.36
VTI1A-205ENST00000483122 TBC1D16Q8TBP0 767 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms