RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 HEATR3Q7Z4Q2 680 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 RAB11FIP4Q86YS3 637 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 TMTC2Q8N394 836 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 VN1R2Q8NFZ6 395 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 ATP8B4Q8TF62 1192 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 MAP4K1Q92918 833 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 RNF25Q96BH1 459 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-206ENST00000483030 PRRX2Q99811 253 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 ADAM2Q99965 735 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 SDF4Q9BRK5 362 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 CDHR5Q9HBB8 845 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 ERVK-5Q9HDB9 667 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 AAASQ9NRG9 546 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 TYW1Q9NV66 732 aaKnown RBP8.44□□□□□ -1.06
CSDE1-206ENST00000483030 TMEM260Q9NX78 707 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 SSUH2Q9Y2M2 353 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 NOC2LQ9Y3T9 749 aaKnown RBP8.44□□□□□ -1.06
CSDE1-206ENST00000483030 RBM8AQ9Y5S9 174 aaKnown RBP8.44□□□□□ -1.06
CSDE1-206ENST00000483030 KDM3AQ9Y4C1 1321 aa8.44□□□□□ -1.06
CSDE1-206ENST00000483030 LAMA4Q16363 1823 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 TTC3P53804 2025 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 DENND3A2RUS2 1198 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 RPS6KA5O75582 802 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 ATF7P17544 494 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-206ENST00000483030 AVPR2P30518 371 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 MCM5P33992 734 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 VCPP55072 806 aaKnown RBP8.43□□□□□ -1.06
CSDE1-206ENST00000483030 UBE3AQ05086 875 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 SIGLEC14Q08ET2 396 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 APOBRQ0VD83 1088 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 ITGB3BPQ13352 177 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-206ENST00000483030 COL9A3Q14050 684 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-206ENST00000483030 DUSP6Q16828 381 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 SLC24A5Q71RS6 500 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 THNSL1Q8IYQ7 743 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 KIAA0319LQ8IZA0 1049 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 FANCBQ8NB91 859 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 TMEM40Q8WWA1 233 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 SUSD6Q92537 303 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 PGBD1Q96JS3 809 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 NEK1Q96PY6 1258 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 MTA3Q9BTC8 594 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 APOL5Q9BWW9 433 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 TLR9Q9NR96 1032 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 FAM86C1Q9NVL1 165 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 HCSTQ9UBK5 93 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 ST3GAL5Q9UNP4 418 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 TECTAO75443 2155 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 NFASCO94856 1347 aa8.43□□□□□ -1.06
CSDE1-206ENST00000483030 MYH6P13533 1939 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 C9IYK1 514 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 DDX39AO00148 427 aaKnown RBP8.42□□□□□ -1.06
CSDE1-206ENST00000483030 SH2B2O14492 632 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-206ENST00000483030 BACH1O14867 736 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 GPR182O15218 404 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 ST18O60284 1047 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 HBP1O60381 514 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 ATG7O95352 703 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 CCNE2O96020 404 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 CALM1P0DP23 149 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 CALM2P0DP24 149 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 CALM3P0DP25 149 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 FGFR1P11362 822 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 SP100P23497 879 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-206ENST00000483030 TECP42680 631 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 LIFRP42702 1097 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 FAM189BP81408 668 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 CEP55Q53EZ4 464 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 PLPP4Q5VZY2 271 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 PDE12Q6L8Q7 609 aaKnown RBP8.42□□□□□ -1.06
CSDE1-206ENST00000483030 ANKRD54Q6NXT1 300 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 SYCE2Q6PIF2 218 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 TMTC3Q6ZXV5 915 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 COLGALT1Q8NBJ5 622 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 ATOH1Q92858 354 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-206ENST00000483030 ASIC4Q96FT7 647 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 TMEM87BQ96K49 555 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 SNX27Q96L92 541 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 PPP1R16BQ96T49 567 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 CDCA3Q99618 268 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-206ENST00000483030 LRRC2Q9BYS8 371 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 S1PR5Q9H228 398 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 ATP6V0A4Q9HBG4 840 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 AGO4Q9HCK5 861 aaKnown RBP8.42□□□□□ -1.06
CSDE1-206ENST00000483030 RGS18Q9NS28 235 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 C1orf112Q9NSG2 853 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 SLC12A7Q9Y666 1083 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 ZNF318Q5VUA4 2279 aa8.42□□□□□ -1.06
CSDE1-206ENST00000483030 WDFY4Q6ZS81 3184 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 RALGAPA2Q2PPJ7 1873 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 IGKV6D-21A0A0A0MT36 114 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 FSD2A1L4K1 749 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 HIDE1A8MVS5 230 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 MEIS1O00470 390 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 FSCN2O14926 492 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 GFRA3O60609 400 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 FOSP01100 380 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-206ENST00000483030 PDGFBP01127 241 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-206ENST00000483030 LAG3P18627 525 aa8.41□□□□□ -1.06
CSDE1-206ENST00000483030 ZNF76P36508 570 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms