RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 OGFOD2Q6N063 350 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 UNQ6494/PRO21346Q6UXR6 183 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 FRMD7Q6ZUT3 714 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 SPICE1Q8N0Z3 855 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 LILRA2Q8N149 483 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 NLGN2Q8NFZ4 835 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 SYTL4Q96C24 671 aaPredicted RBP4.68□□□□□ -1.66
CLCC1-209ENST00000482889 FOXRED1Q96CU9 486 aaPredicted RBP4.68□□□□□ -1.66
CLCC1-209ENST00000482889 ACO2Q99798 780 aaKnown RBP4.68□□□□□ -1.66
CLCC1-209ENST00000482889 NAA15Q9BXJ9 866 aaKnown RBP4.68□□□□□ -1.66
CLCC1-209ENST00000482889 SMOC1Q9H4F8 434 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 DDX21Q9NR30 783 aaKnown RBP eCLIP4.68□□□□□ -1.66
CLCC1-209ENST00000482889 ZNF277Q9NRM2 450 aaPredicted RBP4.68□□□□□ -1.66
CLCC1-209ENST00000482889 DNAJC28Q9NX36 388 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 FNIP2Q9P278 1114 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 IMPACTQ9P2X3 320 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 USP25Q9UHP3 1055 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 INVSQ9Y283 1065 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 ZNF652Q9Y2D9 606 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 PTPN22Q9Y2R2 807 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 DAAM1Q9Y4D1 1078 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 PPP2R3BQ9Y5P8 575 aa4.68□□□□□ -1.66
CLCC1-209ENST00000482889 FITM1A5D6W6 292 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 ZNF503-AS2A6NEH8 195 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 CREB3O43889 395 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 POU2F2P09086 479 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 ENDOUP21128 410 aaKnown RBP4.67□□□□□ -1.66
CLCC1-209ENST00000482889 GALK1P51570 392 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 EPHA5P54756 1037 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 RBM10P98175 930 aaKnown RBP4.67□□□□□ -1.66
CLCC1-209ENST00000482889 CHRNEQ04844 493 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 GRIN1Q05586 938 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 DUSP4Q13115 394 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 PITRM1Q5JRX3 1037 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 LILRA6Q6PI73 481 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 KCTD1Q719H9 257 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 CXorf67Q86X51 503 aaPredicted RBP4.67□□□□□ -1.66
CLCC1-209ENST00000482889 OXR1Q8N573 874 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 LZTR1Q8N653 840 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 PPM1NQ8N819 430 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 ANKS4BQ8N8V4 417 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 HPS3Q969F9 1004 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 STRBPQ96SI9 672 aaKnown RBP4.67□□□□□ -1.66
CLCC1-209ENST00000482889 PCIF1Q9H4Z3 704 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 PTPRHQ9HD43 1115 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 PRDM11Q9NQV5 511 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 ACSS2Q9NR19 701 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 KCNH7Q9NS40 1196 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.67□□□□□ -1.66
CLCC1-209ENST00000482889 TNFRSF10DQ9UBN6 386 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 INTUQ9ULD6 942 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 ATP23Q9Y6H3 246 aa4.67□□□□□ -1.66
CLCC1-209ENST00000482889 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.66□□□□□ -1.66
CLCC1-209ENST00000482889 PMM2O15305 246 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 SGSM2O43147 1006 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 CTNND1O60716 968 aaKnown RBP4.66□□□□□ -1.66
CLCC1-209ENST00000482889 DGKIO75912 1065 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 MMEP08473 750 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 MYL3P08590 195 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 SLC5A1P13866 664 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 PTPN1P18031 435 aaKnown RBP4.66□□□□□ -1.66
CLCC1-209ENST00000482889 EDNRBP24530 442 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 HK2P52789 917 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 ERVFC1P60507 584 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 ALDH6A1Q02252 535 aaKnown RBP4.66□□□□□ -1.66
CLCC1-209ENST00000482889 TRIM25Q14258 630 aaKnown RBP4.66□□□□□ -1.66
CLCC1-209ENST00000482889 DHX8Q14562 1220 aaKnown RBP4.66□□□□□ -1.66
CLCC1-209ENST00000482889 BRD3Q15059 726 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 SAFBQ15424 915 aaKnown RBP eCLIP4.66□□□□□ -1.66
CLCC1-209ENST00000482889 FSCN1Q16658 493 aaKnown RBP4.66□□□□□ -1.66
CLCC1-209ENST00000482889 FIGNQ5HY92 759 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 ATAT1Q5SQI0 421 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 BTBD8Q5XKL5 378 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 STEAP3Q658P3 488 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 CHST15Q7LFX5 561 aaPredicted RBP4.66□□□□□ -1.66
CLCC1-209ENST00000482889 OVCH2Q7RTZ1 564 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 RTN4RL1Q86UN2 441 aaPredicted RBP4.66□□□□□ -1.66
CLCC1-209ENST00000482889 MORC1Q86VD1 984 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 RIOX2Q8IUF8 465 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 SPPL2CQ8IUH8 684 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 ZBTB34Q8NCN2 500 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 ABHD4Q8TB40 342 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 MYLIPQ8WY64 445 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 SCYL1Q96KG9 808 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 NUP88Q99567 741 aaPredicted RBP4.66□□□□□ -1.66
CLCC1-209ENST00000482889 POFUT1Q9H488 388 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 RIC8BQ9NVN3 520 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 RCAN3Q9UKA8 241 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 GPR45Q9Y5Y3 372 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 MRFAP1Q9Y605 127 aa4.66□□□□□ -1.66
CLCC1-209ENST00000482889 IFRD1O00458 451 aaPredicted RBP4.65□□□□□ -1.67
CLCC1-209ENST00000482889 NDUFS2O75306 463 aa4.65□□□□□ -1.67
CLCC1-209ENST00000482889 CYP17A1P05093 508 aa4.65□□□□□ -1.67
CLCC1-209ENST00000482889 ENPP1P22413 925 aa4.65□□□□□ -1.67
CLCC1-209ENST00000482889 CD40P25942 277 aa4.65□□□□□ -1.67
CLCC1-209ENST00000482889 SDHAP31040 664 aa4.65□□□□□ -1.67
CLCC1-209ENST00000482889 ECE1P42892 770 aa4.65□□□□□ -1.67
CLCC1-209ENST00000482889 KIR2DL1P43626 348 aaPredicted RBP4.65□□□□□ -1.67
CLCC1-209ENST00000482889 KIR2DL2P43627 348 aaPredicted RBP4.65□□□□□ -1.67
CLCC1-209ENST00000482889 RTP1P59025 263 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms