RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 GPNMBQ14956 572 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 TARBP2Q15633 366 aaKnown RBP18.59■□□□□ 0.57
HMGN1-214ENST00000482733 OTUD6AQ7L8S5 288 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 EXOC8Q8IYI6 725 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 ZNF710Q8N1W2 664 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 VWCEQ96DN2 955 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 JPH2Q9BR39 696 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-214ENST00000482733 RGL1Q9NZL6 768 aa18.59■□□□□ 0.57
HMGN1-214ENST00000482733 POTEMA6NI47 508 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 BAIAP3O94812 1187 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 LYPLA2O95372 231 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 BMP15O95972 392 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 MGAT3Q09327 533 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 TBC1D8BQ0IIM8 1120 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 PDIA5Q14554 519 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 MBTPS1Q14703 1052 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 MTERF2Q49AM1 385 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 RASIP1Q5U651 963 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 CNKSR3Q6P9H4 555 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 ANO5Q75V66 913 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 TPH2Q8IWU9 490 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 KIAA0319LQ8IZA0 1049 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 METTL13Q8N6R0 699 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 ZBTB10Q96DT7 871 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 ZSCAN16Q9H4T2 348 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-214ENST00000482733 MTMR6Q9Y217 621 aa18.58■□□□□ 0.56
HMGN1-214ENST00000482733 EFCAB14O75071 495 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 CHRNA1P02708 482 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 YWHABP31946 246 aaKnown RBP18.57■□□□□ 0.56
HMGN1-214ENST00000482733 ATP2C1P98194 919 aaPredicted RBP18.57■□□□□ 0.56
HMGN1-214ENST00000482733 CYP4A11Q02928 519 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 CTTNQ14247 550 aaKnown RBP18.57■□□□□ 0.56
HMGN1-214ENST00000482733 HAUS3Q68CZ6 603 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 DTHD1Q6ZMT9 781 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 OTOP2Q7RTS6 562 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 FERMT3Q86UX7 667 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 MAP7D2Q96T17 732 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 POLR3CQ9BUI4 534 aaPredicted RBP18.57■□□□□ 0.56
HMGN1-214ENST00000482733 TUFT1Q9NNX1 390 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 WRAP73Q9P2S5 460 aaPredicted RBP18.57■□□□□ 0.56
HMGN1-214ENST00000482733 TRPV2Q9Y5S1 764 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 CDY2AQ9Y6F7 541 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 SQORQ9Y6N5 450 aa18.57■□□□□ 0.56
HMGN1-214ENST00000482733 KDM3AQ9Y4C1 1321 aa18.56■□□□□ 0.56
HMGN1-214ENST00000482733 XRCC6P12956 609 aaKnown RBP eCLIP18.56■□□□□ 0.56
HMGN1-214ENST00000482733 MUTP22033 750 aa18.56■□□□□ 0.56
HMGN1-214ENST00000482733 RESTQ13127 1097 aa18.56■□□□□ 0.56
HMGN1-214ENST00000482733 BECN1Q14457 450 aa18.56■□□□□ 0.56
HMGN1-214ENST00000482733 ARL6IP4Q66PJ3 421 aaKnown RBP18.56■□□□□ 0.56
HMGN1-214ENST00000482733 EFCAB12Q6NXP0 572 aa18.56■□□□□ 0.56
HMGN1-214ENST00000482733 USP38Q8NB14 1042 aa18.56■□□□□ 0.56
HMGN1-214ENST00000482733 SEPT8Q92599 483 aa18.56■□□□□ 0.56
HMGN1-214ENST00000482733 APBB2Q92870 758 aa18.56■□□□□ 0.56
HMGN1-214ENST00000482733 CEP170P1Q96L14 293 aa18.56■□□□□ 0.56
HMGN1-214ENST00000482733 CELF4Q9BZC1 486 aaKnown RBP18.56■□□□□ 0.56
HMGN1-214ENST00000482733 CYP26B1Q9NR63 512 aa18.56■□□□□ 0.56
HMGN1-214ENST00000482733 LRWD1Q9UFC0 647 aa18.56■□□□□ 0.56
HMGN1-214ENST00000482733 TANC1Q9C0D5 1861 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-214ENST00000482733 ABHD14A-ACY1A0A1B0GW23 586 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-214ENST00000482733 ZBBXA8MT70 800 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 MAFO75444 373 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-214ENST00000482733 RPA1P27694 616 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 RFC5P40937 340 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 DNM2P50570 870 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 CDC42EP1Q00587 391 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 IKBKEQ14164 716 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 PLEKHG4Q58EX7 1191 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 FAM43BQ6ZT52 329 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-214ENST00000482733 LINC01465Q8N7H1 131 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 IGSF22Q8N9C0 903 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 SLC7A3Q8WY07 619 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 CEP89Q96ST8 783 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 SUGCTQ9HAC7 445 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 ANKEF1Q9NU02 776 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 SLC4A7Q9Y6M7 1214 aa18.55■□□□□ 0.56
HMGN1-214ENST00000482733 KAT6AQ92794 2004 aa18.54■□□□□ 0.56
HMGN1-214ENST00000482733 IGKV6-21A0A0C4DH24 114 aa18.54■□□□□ 0.56
HMGN1-214ENST00000482733 TMEM150BA6NC51 233 aa18.54■□□□□ 0.56
HMGN1-214ENST00000482733 SMAD3P84022 425 aaKnown RBP18.54■□□□□ 0.56
HMGN1-214ENST00000482733 FBXO47Q5MNV8 452 aa18.54■□□□□ 0.56
HMGN1-214ENST00000482733 PLA2G4FQ68DD2 849 aa18.54■□□□□ 0.56
HMGN1-214ENST00000482733 CATSPER3Q86XQ3 398 aa18.54■□□□□ 0.56
HMGN1-214ENST00000482733 DBF4BQ8NFT6 615 aa18.54■□□□□ 0.56
HMGN1-214ENST00000482733 PHOSPHO2Q8TCD6 241 aa18.54■□□□□ 0.56
HMGN1-214ENST00000482733 CCDC43Q96MW1 224 aaKnown RBP18.54■□□□□ 0.56
HMGN1-214ENST00000482733 NACC1Q96RE7 527 aa18.54■□□□□ 0.56
HMGN1-214ENST00000482733 CXXC1Q9P0U4 656 aaPredicted RBP18.54■□□□□ 0.56
HMGN1-214ENST00000482733 AKT3Q9Y243 479 aa18.54■□□□□ 0.56
HMGN1-214ENST00000482733 TRIOBPQ9H2D6 2365 aa18.54■□□□□ 0.56
HMGN1-214ENST00000482733 TRIP12Q14669 1992 aaPredicted RBP18.53■□□□□ 0.56
HMGN1-214ENST00000482733 GAS2O43903 313 aaKnown RBP18.53■□□□□ 0.56
HMGN1-214ENST00000482733 MED24O75448 989 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 SPATA31C1P0DKV0 1188 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 GHRP10912 638 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 KCNJ6P48051 423 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 FXR1P51114 621 aaKnown RBP eCLIP18.53■□□□□ 0.56
HMGN1-214ENST00000482733 CLCN3P51790 818 aa18.53■□□□□ 0.56
HMGN1-214ENST00000482733 POLGP54098 1239 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms