RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TMEFF1Q8IYR6 380 aa8.12□□□□□ -1.11
CLK1-212ENST00000482590 LRRC3Q9BY71 257 aa8.12□□□□□ -1.11
CLK1-212ENST00000482590 NYXQ9GZU5 481 aa8.12□□□□□ -1.11
CLK1-212ENST00000482590 PRDM14Q9GZV8 571 aa8.12□□□□□ -1.11
CLK1-212ENST00000482590 SLKQ9H2G2 1235 aaPredicted RBP8.12□□□□□ -1.11
CLK1-212ENST00000482590 COPRSQ9NQ92 184 aa8.12□□□□□ -1.11
CLK1-212ENST00000482590 KCNQ5Q9NR82 932 aa8.12□□□□□ -1.11
CLK1-212ENST00000482590 PCDHGB7Q9Y5F8 929 aa8.12□□□□□ -1.11
CLK1-212ENST00000482590 RIC1Q4ADV7 1423 aa8.12□□□□□ -1.11
CLK1-212ENST00000482590 ADAMTS20P59510 1910 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 ABCC12Q96J65 1359 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 IBTKQ9P2D0 1353 aaPredicted RBP8.11□□□□□ -1.11
CLK1-212ENST00000482590 FADS2P1A8MWK0 482 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 SIGLEC6O43699 453 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 SASH1O94885 1247 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 VIL1P09327 827 aaKnown RBP8.11□□□□□ -1.11
CLK1-212ENST00000482590 HSPA1AP0DMV8 641 aaKnown RBP8.11□□□□□ -1.11
CLK1-212ENST00000482590 HSPA1BP0DMV9 641 aaKnown RBP8.11□□□□□ -1.11
CLK1-212ENST00000482590 ALDH1B1P30837 517 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 UBE4AQ14139 1066 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 VMACQ2NL98 169 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 ODR4Q5SWX8 454 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 CDCP2Q5VXM1 449 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 CCSAPQ6IQ19 270 aaPredicted RBP8.11□□□□□ -1.11
CLK1-212ENST00000482590 NGEFQ8N5V2 710 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 PRPF38AQ8NAV1 312 aaKnown RBP8.11□□□□□ -1.11
CLK1-212ENST00000482590 CXorf38Q8TB03 319 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 MZB1Q8WU39 189 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 FCRL2Q96LA5 508 aaPredicted RBP8.11□□□□□ -1.11
CLK1-212ENST00000482590 PNNQ9H307 717 aaKnown RBP8.11□□□□□ -1.11
CLK1-212ENST00000482590 KLHL14Q9P2G3 628 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 TNFRSF10DQ9UBN6 386 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 LRRC37AA6NMS7 1700 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 LTBP1Q14766 1721 aa8.11□□□□□ -1.11
CLK1-212ENST00000482590 MAP3K15Q6ZN16 1313 aa8.1□□□□□ -1.11
CLK1-212ENST00000482590 MYH3P11055 1940 aa8.1□□□□□ -1.11
CLK1-212ENST00000482590 HSF5Q4G112 596 aaPredicted RBP8.1□□□□□ -1.11
CLK1-212ENST00000482590 ERMP1Q7Z2K6 904 aa8.1□□□□□ -1.11
CLK1-212ENST00000482590 LDHDQ86WU2 507 aa8.1□□□□□ -1.11
CLK1-212ENST00000482590 RTKN2Q8IZC4 609 aa8.1□□□□□ -1.11
CLK1-212ENST00000482590 FEZF2Q8TBJ5 459 aa8.1□□□□□ -1.11
CLK1-212ENST00000482590 RPGRQ92834 1020 aaKnown RBP8.1□□□□□ -1.11
CLK1-212ENST00000482590 SCYL1Q96KG9 808 aa8.1□□□□□ -1.11
CLK1-212ENST00000482590 ZNF512BQ96KM6 892 aaPredicted RBP8.1□□□□□ -1.11
CLK1-212ENST00000482590 IER2Q9BTL4 223 aa8.1□□□□□ -1.11
CLK1-212ENST00000482590 CNNM2Q9H8M5 875 aa8.1□□□□□ -1.11
CLK1-212ENST00000482590 ZNF277Q9NRM2 450 aaPredicted RBP8.1□□□□□ -1.11
CLK1-212ENST00000482590 MIS18AQ9NYP9 233 aa8.1□□□□□ -1.11
CLK1-212ENST00000482590 GPR55Q9Y2T6 319 aaPredicted RBP8.1□□□□□ -1.11
CLK1-212ENST00000482590 THSD7BQ9C0I4 1608 aa8.1□□□□□ -1.11
CLK1-212ENST00000482590 ZNF541Q9H0D2 1346 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 SPEF2Q9C093 1822 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 ABLIM1O14639 778 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 GREM1O60565 184 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 MYL6BP14649 208 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 IARSP41252 1262 aaKnown RBP8.09□□□□□ -1.11
CLK1-212ENST00000482590 HLFQ16534 295 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 OLFML2BQ68BL8 750 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 GALNT18Q6P9A2 607 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 KRBA2Q6ZNG9 492 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 IGDCC3Q8IVU1 814 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 ATG4CQ96DT6 458 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 CHST7Q9NS84 486 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 SIRPGQ9P1W8 387 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 HACL1Q9UJ83 578 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 RRP7AQ9Y3A4 280 aaKnown RBP8.09□□□□□ -1.11
CLK1-212ENST00000482590 COMMD10Q9Y6G5 202 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 RPS6KL1Q9Y6S9 549 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 SNED1Q8TER0 1413 aa8.09□□□□□ -1.11
CLK1-212ENST00000482590 COL4A5P29400 1685 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 RNF123Q5XPI4 1314 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 KLRG2A4D1S0 409 aaPredicted RBP8.08□□□□□ -1.12
CLK1-212ENST00000482590 ERVV-1B6SEH8 477 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 WDHD1O75717 1129 aaPredicted RBP8.08□□□□□ -1.12
CLK1-212ENST00000482590 MPOP05164 745 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 GPTP24298 496 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 CRKP46108 304 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 EIF4A1P60842 406 aaKnown RBP8.08□□□□□ -1.12
CLK1-212ENST00000482590 SKOR2Q2VWA4 1001 aaPredicted RBP8.08□□□□□ -1.12
CLK1-212ENST00000482590 CNKSR3Q6P9H4 555 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 FAM129CQ86XR2 697 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 NAP1L5Q96NT1 182 aaPredicted RBP8.08□□□□□ -1.12
CLK1-212ENST00000482590 SENP7Q9BQF6 1050 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 TAF1DQ9H5J8 278 aaPredicted RBP8.08□□□□□ -1.12
CLK1-212ENST00000482590 EHMT1Q9H9B1 1298 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 ERVK13-1Q9NX77 482 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 TCEAL9Q9UHQ7 104 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 TSPYL4Q9UJ04 414 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 TAF6LQ9Y6J9 622 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 CNTNAP1P78357 1384 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 PSME4Q14997 1843 aa8.08□□□□□ -1.12
CLK1-212ENST00000482590 UBN2Q6ZU65 1347 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 PASKQ96RG2 1323 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 WTIPA6NIX2 430 aaPredicted RBP8.07□□□□□ -1.12
CLK1-212ENST00000482590 CDC45O75419 566 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 CLEC3AO75596 197 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 EIF4A3P38919 411 aaKnown RBP8.07□□□□□ -1.12
CLK1-212ENST00000482590 EIF6P56537 245 aaKnown RBP8.07□□□□□ -1.12
CLK1-212ENST00000482590 KRTAP10-2P60368 255 aa8.07□□□□□ -1.12
CLK1-212ENST00000482590 LMOD3Q0VAK6 560 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms