RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ABCF2Q9UG63 623 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 BTAF1O14981 1849 aa8.75□□□□□ -1.01
SNX13-208ENST00000482558 A0A1B0GUL6 1792 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 ALG1L2C9J202 215 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 TM4SF5O14894 197 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 NPHP1O15259 732 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 BAG3O95817 575 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 FOSP01100 380 aaPredicted RBP8.74□□□□□ -1.01
SNX13-208ENST00000482558 MMP1P03956 469 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 CD53P19397 219 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 CEBPZQ03701 1054 aaKnown RBP8.74□□□□□ -1.01
SNX13-208ENST00000482558 GRAPQ13588 217 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 CT47A1Q5JQC4 288 aaPredicted RBP8.74□□□□□ -1.01
SNX13-208ENST00000482558 PEAR1Q5VY43 1037 aaPredicted RBP8.74□□□□□ -1.01
SNX13-208ENST00000482558 ZNF804AQ7Z570 1209 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 NOSTRINQ8IVI9 506 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 CRACR2BQ8N4Y2 399 aaPredicted RBP8.74□□□□□ -1.01
SNX13-208ENST00000482558 GRAPLQ8TC17 118 aaPredicted RBP8.74□□□□□ -1.01
SNX13-208ENST00000482558 CPLX3Q8WVH0 158 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 NSUN4Q96CB9 384 aaKnown RBP8.74□□□□□ -1.01
SNX13-208ENST00000482558 PYM1Q9BRP8 204 aaKnown RBP8.74□□□□□ -1.01
SNX13-208ENST00000482558 ZKSCAN3Q9BRR0 538 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 BCO2Q9BYV7 579 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 ZNF700Q9H0M5 742 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 TOMM22Q9NS69 142 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 FAM8A1Q9UBU6 413 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 TRPC5Q9UL62 973 aaPredicted RBP8.74□□□□□ -1.01
SNX13-208ENST00000482558 MSRB2Q9Y3D2 182 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 XDHP47989 1333 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 LY75O60449 1722 aa8.74□□□□□ -1.01
SNX13-208ENST00000482558 MAST2Q6P0Q8 1798 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 MYO5AQ9Y4I1 1855 aaKnown RBP8.73□□□□□ -1.01
SNX13-208ENST00000482558 A0A1W2PP55 124 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 HMX2A2RU54 273 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 LINC01387J3KSC0 135 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 PRPF3O43395 683 aaKnown RBP8.73□□□□□ -1.01
SNX13-208ENST00000482558 CDC27P30260 824 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 KIF5BP33176 963 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 GYG1P46976 350 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 SOX9P48436 509 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 GNAQP50148 359 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 ST5P78524 1137 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 GUCY1B3Q02153 619 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 COL9A2Q14055 689 aaPredicted RBP8.73□□□□□ -1.01
SNX13-208ENST00000482558 GRM2Q14416 872 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 IFIT1BQ5T764 474 aaKnown RBP8.73□□□□□ -1.01
SNX13-208ENST00000482558 KIAA0319Q5VV43 1072 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 NXPE4Q6UWF7 544 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 PLA2G4DQ86XP0 818 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 JAMLQ86YT9 394 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 KLHL23Q8NBE8 558 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 CELF1Q92879 486 aaKnown RBP8.73□□□□□ -1.01
SNX13-208ENST00000482558 FAM83CQ9BQN1 747 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 SLC26A6Q9BXS9 759 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 OSBPL7Q9BZF2 842 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 TRIM5Q9C035 493 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 TMX4Q9H1E5 349 aaPredicted RBP8.73□□□□□ -1.01
SNX13-208ENST00000482558 LIN7BQ9HAP6 207 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 KBTBD4Q9NVX7 518 aa8.73□□□□□ -1.01
SNX13-208ENST00000482558 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.73□□□□□ -1.01
SNX13-208ENST00000482558 KIAA1551Q9HCM1 1747 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 MINDY4BA8MYZ0 360 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 IKBKBO14920 756 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 PRKAB2O43741 272 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 NRDCO43847 1150 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 BBOX1O75936 387 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 ZNF202O95125 648 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 ACPPP15309 386 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 PMLP29590 882 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 SYKP43405 635 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 TRAPPC10P48553 1259 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 ZNF75DP51815 510 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 GSDMDP57764 484 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 SQSTM1Q13501 440 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 IQCB1Q15051 598 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 SEC23AQ15436 765 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 TCEA2Q15560 299 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 TKFCQ3LXA3 575 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 RRP12Q5JTH9 1297 aaKnown RBP8.72□□□□□ -1.01
SNX13-208ENST00000482558 AXDND1Q5T1B0 1012 aaPredicted RBP8.72□□□□□ -1.01
SNX13-208ENST00000482558 MEX3CQ5U5Q3 659 aaKnown RBP8.72□□□□□ -1.01
SNX13-208ENST00000482558 RESP18Q5W5W9 173 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 DZIP1Q86YF9 867 aaKnown RBP8.72□□□□□ -1.01
SNX13-208ENST00000482558 FAM20CQ8IXL6 584 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 DRC7Q8IY82 874 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 SYNPOQ8N3V7 929 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 CNBD1Q8NA66 436 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 MIGA1Q8NAN2 632 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 TBC1D22AQ8WUA7 517 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 RBM17Q96I25 401 aaKnown RBP8.72□□□□□ -1.01
SNX13-208ENST00000482558 OSMRQ99650 979 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 ARPC5LQ9BPX5 153 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 GOLPH3LQ9H4A5 285 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 GINM1Q9NU53 330 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 SPTLC3Q9NUV7 552 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 IMPACTQ9P2X3 320 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 PLAAQ9Y263 795 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 CLIC4Q9Y696 253 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 TNKSO95271 1327 aa8.72□□□□□ -1.01
SNX13-208ENST00000482558 CACNA1SQ13698 1873 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms