RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 POFUT1Q9H488 388 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 EPB41L4AQ9HCS5 686 aaPredicted RBP7.79□□□□□ -1.16
SF3B1-210ENST00000482158 DLL4Q9NR61 685 aa7.79□□□□□ -1.16
SF3B1-210ENST00000482158 USP36Q9P275 1121 aaKnown RBP7.79□□□□□ -1.16
SF3B1-210ENST00000482158 UBA6A0AVT1 1052 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-210ENST00000482158 PLA2G1BP04054 148 aaKnown RBP7.78□□□□□ -1.16
SF3B1-210ENST00000482158 IARSP41252 1262 aaKnown RBP7.78□□□□□ -1.16
SF3B1-210ENST00000482158 GPR3P46089 330 aa7.78□□□□□ -1.16
SF3B1-210ENST00000482158 LIMS1P48059 325 aa7.78□□□□□ -1.16
SF3B1-210ENST00000482158 RGS3P49796 1198 aa7.78□□□□□ -1.16
SF3B1-210ENST00000482158 SLC6A3Q01959 620 aa7.78□□□□□ -1.16
SF3B1-210ENST00000482158 TTC38Q5R3I4 469 aa7.78□□□□□ -1.16
SF3B1-210ENST00000482158 ZBTB41Q5SVQ8 909 aa7.78□□□□□ -1.16
SF3B1-210ENST00000482158 CXorf67Q86X51 503 aaPredicted RBP7.78□□□□□ -1.16
SF3B1-210ENST00000482158 KCNN1Q92952 543 aa7.78□□□□□ -1.16
SF3B1-210ENST00000482158 TMEM209Q96SK2 561 aa7.78□□□□□ -1.16
SF3B1-210ENST00000482158 SMAD5Q99717 465 aaKnown RBP7.78□□□□□ -1.16
SF3B1-210ENST00000482158 MYL10Q9BUA6 226 aa7.78□□□□□ -1.16
SF3B1-210ENST00000482158 GALNT8Q9NY28 637 aa7.78□□□□□ -1.16
SF3B1-210ENST00000482158 PRPF6O94906 941 aaKnown RBP7.77□□□□□ -1.17
SF3B1-210ENST00000482158 S100BP04271 92 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-210ENST00000482158 SCAND1P57086 179 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 HTRA3P83110 453 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 TTF1Q15361 905 aaPredicted RBP7.77□□□□□ -1.17
SF3B1-210ENST00000482158 ABCB5Q2M3G0 1257 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 ODR4Q5SWX8 454 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 UNQ6494/PRO21346Q6UXR6 183 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 KANSL1Q7Z3B3 1105 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 C7orf31Q8N865 590 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 ZSWIM3Q96MP5 696 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 TUBGCP5Q96RT8 1024 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 ORAI2Q96SN7 254 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 CEP89Q96ST8 783 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 FAN1Q9Y2M0 1017 aa7.77□□□□□ -1.17
SF3B1-210ENST00000482158 H2AFYO75367 372 aaKnown RBP7.76□□□□□ -1.17
SF3B1-210ENST00000482158 FBXO21O94952 628 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 MED14OSP0DP75 135 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 GLDCP23378 1020 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 ECE1P42892 770 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 GLRBP48167 497 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 MANFP55145 182 aaKnown RBP7.76□□□□□ -1.17
SF3B1-210ENST00000482158 MCL1Q07820 350 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 STILQ15468 1287 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 KYQ8NBH2 561 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 E2F7Q96AV8 911 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 PRDM12Q9H4Q4 367 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 METTL14Q9HCE5 456 aaKnown RBP7.76□□□□□ -1.17
SF3B1-210ENST00000482158 PCDH18Q9HCL0 1135 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 ARHGAP20Q9P2F6 1191 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 TMPRSS11EQ9UL52 423 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 G3BP2Q9UN86 482 aaKnown RBP7.76□□□□□ -1.17
SF3B1-210ENST00000482158 PPP2R3BQ9Y5P8 575 aa7.76□□□□□ -1.17
SF3B1-210ENST00000482158 PRSS38A1L453 326 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 GOLGA8AA7E2F4 631 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 GOLGA8BA8MQT2 603 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 CLEC2LP0C7M8 214 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 COL6A1P12109 1028 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 NEK2P51955 445 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 IL13RA1P78552 427 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 SMAD4Q13485 552 aaKnown RBP7.75□□□□□ -1.17
SF3B1-210ENST00000482158 SSPNQ14714 243 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 KANK2Q63ZY3 851 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 SLFN12LQ6IEE8 588 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 SYDE1Q6ZW31 735 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-210ENST00000482158 C1orf162Q8NEQ5 155 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-210ENST00000482158 SIGLEC10Q96LC7 697 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 TACO1Q9BSH4 297 aaKnown RBP7.75□□□□□ -1.17
SF3B1-210ENST00000482158 BTBD2Q9BX70 525 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 ANO3Q9BYT9 981 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 KCND1Q9NSA2 647 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 ZFP69BQ9UJL9 534 aa7.75□□□□□ -1.17
SF3B1-210ENST00000482158 MT-CO1P00395 513 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 ROM1Q03395 351 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 NOLC1Q14978 699 aaKnown RBP eCLIP7.74□□□□□ -1.17
SF3B1-210ENST00000482158 CT83Q5H943 113 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 PRR31Q5SQ13 230 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 PRAMEF9Q5VWM5 478 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 KIAA1841Q6NSI8 718 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 ESPNLQ6ZVH7 1005 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 FAM129CQ86XR2 697 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 LYSMD2Q8IV50 215 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 STPG3Q8N7X2 389 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 TGFBRAP1Q8WUH2 860 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 JDP2Q8WYK2 163 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 ZBTB8AQ96BR9 441 aa7.74□□□□□ -1.17
SF3B1-210ENST00000482158 FUBP3Q96I24 572 aaKnown RBP eCLIP7.74□□□□□ -1.17
SF3B1-210ENST00000482158 SPATA6Q9NWH7 488 aaPredicted RBP7.74□□□□□ -1.17
SF3B1-210ENST00000482158 TRIM75PA6NK02 468 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 PCDHGA12O60330 932 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 MYBL2P10244 700 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 DLX2Q07687 328 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-210ENST00000482158 ADCY2Q08462 1091 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 PCBP2Q15366 365 aaKnown RBP eCLIP7.73□□□□□ -1.17
SF3B1-210ENST00000482158 FSCN1Q16658 493 aaKnown RBP7.73□□□□□ -1.17
SF3B1-210ENST00000482158 PITRM1Q5JRX3 1037 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 TIGD7Q6NT04 549 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-210ENST00000482158 FNIP1Q8TF40 1166 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 FAXDC2Q96IV6 333 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 ACAP3Q96P50 834 aa7.73□□□□□ -1.17
SF3B1-210ENST00000482158 OR10A5Q9H207 317 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms