RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 RRAGBQ5VZM2 374 aa12.93□□□□□ -0.34
HPS4-212ENST00000481910 PNMA5Q96PV4 448 aa12.93□□□□□ -0.34
HPS4-212ENST00000481910 RNPEPQ9H4A4 650 aa12.93□□□□□ -0.34
HPS4-212ENST00000481910 MOXD2PA6NHM9 499 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 ZBTB39O15060 712 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 POLR2DO15514 142 aaKnown RBP12.92□□□□□ -0.34
HPS4-212ENST00000481910 PLCG1P19174 1290 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 ATP4AP20648 1035 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 YWHABP31946 246 aaKnown RBP12.92□□□□□ -0.34
HPS4-212ENST00000481910 GJA8P48165 433 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 NDUFA8P51970 172 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 ACLYP53396 1101 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 PRKCEQ02156 737 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 KIAA0753Q2KHM9 967 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 CCDC73Q6ZRK6 1079 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 KCTD17Q8N5Z5 321 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 PIGOQ8TEQ8 1089 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 KAT2BQ92831 832 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 VTI1AQ96AJ9 217 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 NACC1Q96RE7 527 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 TSEN34Q9BSV6 310 aaKnown RBP12.92□□□□□ -0.34
HPS4-212ENST00000481910 MTG1Q9BT17 334 aaPredicted RBP12.92□□□□□ -0.34
HPS4-212ENST00000481910 CRISPLD2Q9H0B8 497 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 GOLPH3LQ9H4A5 285 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 NRBP2Q9NSY0 501 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 DNM3Q9UQ16 869 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 KIAA0100Q14667 2235 aaKnown RBP12.92□□□□□ -0.34
HPS4-212ENST00000481910 A0A087X0B3 334 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 DDX11L8A8MPP1 907 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 E9PMD0 336 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 DNM1LO00429 736 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 LYPLA2O95372 231 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 F2P00734 622 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 OATP04181 439 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 SYKP43405 635 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 PSMC6P62333 389 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 SATB1Q01826 763 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 PLCB4Q15147 1175 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 XKR3Q5GH77 459 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 OTUD6AQ7L8S5 288 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 KATNAL1Q9BW62 490 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 TRPC6Q9Y210 931 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 HPSEQ9Y251 543 aa12.92□□□□□ -0.34
HPS4-212ENST00000481910 CABYRO75952 493 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.34
HPS4-212ENST00000481910 STAT6P42226 847 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 PSEN2P49810 448 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 MFSD10Q14728 455 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 TMEM119Q4V9L6 283 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 TSHZ1Q6ZSZ6 1077 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 ANO5Q75V66 913 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 KCNK18Q7Z418 384 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 ATP8B4Q8TF62 1192 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 DHX58Q96C10 678 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 FAM167AQ96KS9 214 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 GLT1D1Q96MS3 346 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 PYM1Q9BRP8 204 aaKnown RBP12.91□□□□□ -0.34
HPS4-212ENST00000481910 SEPT9Q9UHD8 586 aaPredicted RBP12.91□□□□□ -0.34
HPS4-212ENST00000481910 KAT6AQ92794 2004 aa12.91□□□□□ -0.34
HPS4-212ENST00000481910 FAM237AA0A1B0GTK4 181 aa12.9□□□□□ -0.34
HPS4-212ENST00000481910 TMEM150BA6NC51 233 aa12.9□□□□□ -0.34
HPS4-212ENST00000481910 ZNF202O95125 648 aa12.9□□□□□ -0.34
HPS4-212ENST00000481910 STBD1O95210 358 aa12.9□□□□□ -0.34
HPS4-212ENST00000481910 FAM160A1Q05DH4 1040 aa12.9□□□□□ -0.34
HPS4-212ENST00000481910 SH2D3AQ9BRG2 576 aa12.9□□□□□ -0.34
HPS4-212ENST00000481910 BHMT2Q9H2M3 363 aa12.9□□□□□ -0.34
HPS4-212ENST00000481910 PHF24Q9UPV7 400 aa12.9□□□□□ -0.34
HPS4-212ENST00000481910 HAS3O00219 553 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 NRDCO43847 1150 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 HBP1O60381 514 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 LIG1P18858 919 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 NAALADL2Q58DX5 795 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 XKR9Q5GH70 373 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 LRRC15Q8TF66 581 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 PPP1R13LQ8WUF5 828 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 CEP170P1Q96L14 293 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 CCDC43Q96MW1 224 aaKnown RBP12.9□□□□□ -0.35
HPS4-212ENST00000481910 NIFKQ9BYG3 293 aaKnown RBP12.9□□□□□ -0.35
HPS4-212ENST00000481910 ANKEF1Q9NU02 776 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 BLOC1S4Q9NUP1 217 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 STK17AQ9UEE5 414 aa12.9□□□□□ -0.35
HPS4-212ENST00000481910 DBR1Q9UK59 544 aaKnown RBP12.9□□□□□ -0.35
HPS4-212ENST00000481910 A0A1W2PQ45 241 aaPredicted RBP12.89□□□□□ -0.35
HPS4-212ENST00000481910 A0A1W2PQY0 241 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 NR1I2O75469 434 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 EYA4O95677 639 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 SSBP05455 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
HPS4-212ENST00000481910 INSRRP14616 1297 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 NPEPPSP55786 919 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 SNW1Q13573 536 aaKnown RBP12.89□□□□□ -0.35
HPS4-212ENST00000481910 DHX8Q14562 1220 aaKnown RBP12.89□□□□□ -0.35
HPS4-212ENST00000481910 SETDB1Q15047 1291 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 ZKSCAN8Q15776 578 aaPredicted RBP12.89□□□□□ -0.35
HPS4-212ENST00000481910 E2F4Q16254 413 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 LONRF3Q496Y0 759 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 MTERF2Q49AM1 385 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 PLA2G4FQ68DD2 849 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
HPS4-212ENST00000481910 FMR1NBQ8N0W7 255 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms