RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 WDR81Q562E7 1941 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 COL1A2P08123 1366 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.02■□□□□ 0.96
CLK1-211ENST00000481641 MSH4O15457 936 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 DGKIO75912 1065 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 PSAPP07602 524 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 NFX1Q12986 1120 aaKnown RBP21.02■□□□□ 0.96
CLK1-211ENST00000481641 BTG3Q14201 252 aaPredicted RBP21.02■□□□□ 0.96
CLK1-211ENST00000481641 PTPROQ16827 1216 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 TRIM22Q8IYM9 498 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 TMEM40Q8WWA1 233 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 ZNF274Q96GC6 653 aaPredicted RBP21.02■□□□□ 0.96
CLK1-211ENST00000481641 TM6SF1Q9BZW5 370 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 PDRG1Q9NUG6 133 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 TCEAL9Q9UHQ7 104 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 NOC2LQ9Y3T9 749 aaKnown RBP21.02■□□□□ 0.96
CLK1-211ENST00000481641 SAMM50Q9Y512 469 aa21.02■□□□□ 0.96
CLK1-211ENST00000481641 CPLX1O14810 134 aa21.01■□□□□ 0.95
CLK1-211ENST00000481641 CSPG5O95196 566 aa21.01■□□□□ 0.95
CLK1-211ENST00000481641 C22orf31O95567 290 aa21.01■□□□□ 0.95
CLK1-211ENST00000481641 BMPR1AP36894 532 aa21.01■□□□□ 0.95
CLK1-211ENST00000481641 GATMP50440 423 aa21.01■□□□□ 0.95
CLK1-211ENST00000481641 TCEAL5Q5H9L2 206 aa21.01■□□□□ 0.95
CLK1-211ENST00000481641 SMAP1Q8IYB5 467 aaPredicted RBP21.01■□□□□ 0.95
CLK1-211ENST00000481641 CRIPAKQ8N1N5 446 aa21.01■□□□□ 0.95
CLK1-211ENST00000481641 BANK1Q8NDB2 785 aa21.01■□□□□ 0.95
CLK1-211ENST00000481641 TBCKQ8TEA7 893 aa21.01■□□□□ 0.95
CLK1-211ENST00000481641 BBXQ8WY36 941 aaPredicted RBP21.01■□□□□ 0.95
CLK1-211ENST00000481641 FTHL17Q9BXU8 183 aa21.01■□□□□ 0.95
CLK1-211ENST00000481641 GRM6O15303 877 aa21■□□□□ 0.95
CLK1-211ENST00000481641 CHMP2AO43633 222 aa21■□□□□ 0.95
CLK1-211ENST00000481641 MGEA5O60502 916 aa21■□□□□ 0.95
CLK1-211ENST00000481641 VTNP04004 478 aa21■□□□□ 0.95
CLK1-211ENST00000481641 KCNA5P22460 613 aa21■□□□□ 0.95
CLK1-211ENST00000481641 KIZQ2M2Z5 673 aa21■□□□□ 0.95
CLK1-211ENST00000481641 PAN2Q504Q3 1202 aaKnown RBP21■□□□□ 0.95
CLK1-211ENST00000481641 METTL13Q8N6R0 699 aa21■□□□□ 0.95
CLK1-211ENST00000481641 ERVK-5Q9HDB9 667 aa21■□□□□ 0.95
CLK1-211ENST00000481641 PCDHA4Q9UN74 947 aa21■□□□□ 0.95
CLK1-211ENST00000481641 MRPL42Q9Y6G3 142 aaKnown RBP21■□□□□ 0.95
CLK1-211ENST00000481641 ATG2AQ2TAZ0 1938 aa21■□□□□ 0.95
CLK1-211ENST00000481641 C5orf67F2Z3F1 127 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 ZNF862O60290 1169 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 RPS6KA5O75582 802 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 DEXIO95424 95 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 TDP2O95551 362 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 USP11P51784 963 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 CLCN3P51790 818 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 NPY5RQ15761 445 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 UGCGQ16739 394 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 TIGD5Q53EQ6 642 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 NPAS4Q8IUM7 802 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 SLC5A5Q92911 643 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 CLP1Q92989 425 aaKnown RBP20.99■□□□□ 0.95
CLK1-211ENST00000481641 OSMRQ99650 979 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 UNC45AQ9H3U1 944 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 DISC1Q9NRI5 854 aa20.99■□□□□ 0.95
CLK1-211ENST00000481641 WDR64B1ANS9 1081 aa20.98■□□□□ 0.95
CLK1-211ENST00000481641 M0R2N6 131 aa20.98■□□□□ 0.95
CLK1-211ENST00000481641 GAS7O60861 476 aa20.98■□□□□ 0.95
CLK1-211ENST00000481641 RB1P06400 928 aa20.98■□□□□ 0.95
CLK1-211ENST00000481641 EP400NLQ6ZTU2 488 aa20.98■□□□□ 0.95
CLK1-211ENST00000481641 BLIDQ8IZY5 108 aa20.98■□□□□ 0.95
CLK1-211ENST00000481641 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.98■□□□□ 0.95
CLK1-211ENST00000481641 NSUN3Q9H649 340 aaKnown RBP20.98■□□□□ 0.95
CLK1-211ENST00000481641 ST3GAL5Q9UNP4 418 aa20.98■□□□□ 0.95
CLK1-211ENST00000481641 KCNJ14Q9UNX9 436 aa20.98■□□□□ 0.95
CLK1-211ENST00000481641 KIAA1671Q9BY89 1806 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 GPR32O75388 356 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 STAG3L1P0CL83 205 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 SCRN1Q12765 414 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 LEXMQ3ZCV2 418 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 LRCH2Q5VUJ6 765 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 LRRC71Q8N4P6 559 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 ZNF668Q96K58 619 aaPredicted RBP20.97■□□□□ 0.95
CLK1-211ENST00000481641 RIT2Q99578 217 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 ADAM2Q99965 735 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 C11orf84Q9BUA3 381 aaPredicted RBP20.97■□□□□ 0.95
CLK1-211ENST00000481641 TEKT3Q9BXF9 490 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 ALG13Q9NP73 1137 aaKnown RBP20.97■□□□□ 0.95
CLK1-211ENST00000481641 LRFN2Q9ULH4 789 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 RWDD3Q9Y3V2 267 aa20.97■□□□□ 0.95
CLK1-211ENST00000481641 H3BQ06 376 aaPredicted RBP20.96■□□□□ 0.95
CLK1-211ENST00000481641 OATP04181 439 aa20.96■□□□□ 0.95
CLK1-211ENST00000481641 SARSP49591 514 aaKnown RBP20.96■□□□□ 0.95
CLK1-211ENST00000481641 CRYBB1P53674 252 aaPredicted RBP20.96■□□□□ 0.95
CLK1-211ENST00000481641 PRKCEQ02156 737 aa20.96■□□□□ 0.95
CLK1-211ENST00000481641 Q4G0T1 1027 aa20.96■□□□□ 0.95
CLK1-211ENST00000481641 EFCAB12Q6NXP0 572 aa20.96■□□□□ 0.95
CLK1-211ENST00000481641 CPLX2Q6PUV4 134 aaKnown RBP20.96■□□□□ 0.95
CLK1-211ENST00000481641 FAM228AQ86W67 206 aa20.96■□□□□ 0.95
CLK1-211ENST00000481641 CMTR2Q8IYT2 770 aaKnown RBP20.96■□□□□ 0.95
CLK1-211ENST00000481641 TPCN1Q9ULQ1 816 aa20.96■□□□□ 0.95
CLK1-211ENST00000481641 DENND3A2RUS2 1198 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 PSMD10O75832 226 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 IL9P15248 144 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 LINC01465Q8N7H1 131 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 DAGLBQ8NCG7 672 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 FAM167AQ96KS9 214 aa20.95■□□□□ 0.94
CLK1-211ENST00000481641 CD320Q9NPF0 282 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms