RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 IGHA2P01877 340 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 ADCYAP1R1P41586 468 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 RAD51AP2Q09MP3 1159 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 ANO5Q75V66 913 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 TRMT44Q8IYL2 757 aaKnown RBP16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 TRIM47Q96LD4 638 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 PCYT2Q99447 389 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 NIFKQ9BYG3 293 aaKnown RBP16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 SMARCAD1Q9H4L7 1026 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 PARVGQ9HBI0 331 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 OLFML3Q9NRN5 406 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 RNF186Q9NXI6 227 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 NFE2L3Q9Y4A8 694 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 PCDHA2Q9Y5H9 948 aa16.4■□□□□ 0.22
SNRNP200-205ENST00000480835 DGAT1O75907 488 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 TBC1D8O95759 1140 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 MAPTP10636 758 aaKnown RBP16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 CTGFP29279 349 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 CACNB1Q02641 598 aaPredicted RBP16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 CCDC173Q0VFZ6 552 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 TPD52L1Q16890 204 aaPredicted RBP16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 HSDL1Q3SXM5 330 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 UTP14CQ5TAP6 766 aaKnown RBP16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 PLA2G4FQ68DD2 849 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 STXBP4Q6ZWJ1 553 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 SFR1Q86XK3 245 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 MYOCDQ8IZQ8 938 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 PPTC7Q8NI37 304 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 NOC3LQ8WTT2 800 aaKnown RBP16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 COPS5Q92905 334 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 P2RX5Q93086 422 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 CEP170P1Q96L14 293 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 DRC1Q96MC2 740 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 CYP26B1Q9NR63 512 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 SEPT9Q9UHD8 586 aaPredicted RBP16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 MAPK8IP1Q9UQF2 711 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 ZSWIM8A7E2V4 1837 aa16.39■□□□□ 0.21
SNRNP200-205ENST00000480835 RSPH10B2B2RC85 870 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 USO1O60763 962 aaKnown RBP16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 HIP1RO75146 1068 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 ECM2O94769 699 aaPredicted RBP16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 RSPH10BP0C881 870 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 ATP4AP20648 1035 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 NPEPPSP55786 919 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 PLCB2Q00722 1185 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 TNFAIP2Q03169 654 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 CCDC144BQ3MJ40 725 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 CENPPQ6IPU0 288 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 EXOC8Q8IYI6 725 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 MYCT1Q8N699 235 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 SLC17A8Q8NDX2 589 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 MCPH1Q8NEM0 835 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 BBXQ8WY36 941 aaPredicted RBP16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 GLG1Q92896 1179 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 HPS3Q969F9 1004 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 MED15Q96RN5 788 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 FLRT1Q9NZU1 646 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 LARSQ9P2J5 1176 aaKnown RBP16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 UBE4BO95155 1302 aa16.38■□□□□ 0.21
SNRNP200-205ENST00000480835 EIF3DO15371 548 aaKnown RBP eCLIP16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 TRPA1O75762 1119 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 GNRH1P01148 92 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 ZNF865P0CJ78 1059 aaPredicted RBP16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 SMPD1P17405 629 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 HOXD10P28358 340 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 RFC5P40937 340 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 STX17P56962 302 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 LRRC63Q05C16 580 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 SPAG1Q07617 926 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 MAPK7Q13164 816 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 ALCAMQ13740 583 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 CCL14Q16627 93 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 MFSD14CQ5VZR4 134 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 TTI2Q6NXR4 508 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 EPM2AIP1Q7L775 607 aaPredicted RBP16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 OR6J1Q8NGC5 347 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 KIFAP3Q92845 792 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 TSG101Q99816 390 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 HSD3B7Q9H2F3 369 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 MRPL44Q9H9J2 332 aaKnown RBP16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 C17orf75Q9HAS0 396 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 ATP6V0A4Q9HBG4 840 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 FANCLQ9NW38 375 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 SAGE1Q9NXZ1 904 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 KCNG1Q9UIX4 513 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 Q9Y3F1 56 aa16.37■□□□□ 0.21
SNRNP200-205ENST00000480835 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 PPFIA4O75335 1185 aa16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 ADCY5O95622 1261 aa16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 FGFR1OPO95684 399 aaKnown RBP16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 HOXD8P13378 290 aaPredicted RBP16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 ZNF18P17022 549 aa16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 CYP2C19P33261 490 aa16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 RTP1P59025 263 aa16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 ARHGEF6Q15052 776 aa16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 BMT2Q1RMZ1 405 aa16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 MTERF2Q49AM1 385 aa16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 ODR4Q5SWX8 454 aa16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 FAM178BQ8IXR5 827 aa16.36■□□□□ 0.21
SNRNP200-205ENST00000480835 DAW1Q8N136 415 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms