RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 NRBP2Q9NSY0 501 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 MTMR6Q9Y217 621 aa13.54□□□□□ -0.24
CCM2-212ENST00000480382 SMIM35A0A1B0GVV1 85 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 DDX11L8A8MPP1 907 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 STX6O43752 255 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 PARNO95453 639 aaKnown RBP13.53□□□□□ -0.24
CCM2-212ENST00000480382 FGBP02675 491 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 TMEM62Q0P6H9 643 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 TMEM266Q2M3C6 531 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 ANO5Q75V66 913 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 OTOP2Q7RTS6 562 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 RPAINQ86UA6 219 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 NEK9Q8TD19 979 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 OSBPL7Q9BZF2 842 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 CDY2AQ9Y6F7 541 aa13.53□□□□□ -0.24
CCM2-212ENST00000480382 SOX1O00570 391 aaPredicted RBP13.52□□□□□ -0.25
CCM2-212ENST00000480382 DKC1O60832 514 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCM2-212ENST00000480382 SLITRK3O94933 977 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 CHRNA1P02708 482 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 CXCL10P02778 98 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCM2-212ENST00000480382 CLCN3P51790 818 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 MRPS6P82932 125 aaKnown RBP13.52□□□□□ -0.25
CCM2-212ENST00000480382 ATP2C1P98194 919 aaPredicted RBP13.52□□□□□ -0.25
CCM2-212ENST00000480382 TARBP2Q15633 366 aaKnown RBP13.52□□□□□ -0.25
CCM2-212ENST00000480382 TCTN1Q2MV58 587 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 FAM26DQ5JW98 314 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 TPH2Q8IWU9 490 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 C4orf19Q8IY42 314 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 LRRC71Q8N4P6 559 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 METTL13Q8N6R0 699 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 HERVK_113Q902F9 699 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 CEP89Q96ST8 783 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 PPP1R16BQ96T49 567 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 NIFKQ9BYG3 293 aaKnown RBP13.52□□□□□ -0.25
CCM2-212ENST00000480382 ZSWIM4Q9H7M6 989 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 CXXC1Q9P0U4 656 aaPredicted RBP13.52□□□□□ -0.25
CCM2-212ENST00000480382 TRPV2Q9Y5S1 764 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 SZT2Q5T011 3432 aa13.52□□□□□ -0.25
CCM2-212ENST00000480382 ZBBXA8MT70 800 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 M0QZ92 97 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 LAD1O00515 517 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 ZBTB39O15060 712 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 MAGEB2O15479 319 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 MED24O75448 989 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 GHRP10912 638 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 YWHABP31946 246 aaKnown RBP13.51□□□□□ -0.25
CCM2-212ENST00000480382 PRPHP41219 470 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 NPEPPSP55786 919 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 TBC1D8BQ0IIM8 1120 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 IL17AQ16552 155 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 LRIT3Q3SXY7 679 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 RASIP1Q5U651 963 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 EFCAB12Q6NXP0 572 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 FAM173BQ6P4H8 233 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 CNKSR3Q6P9H4 555 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 KIAA0319LQ8IZA0 1049 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 LINC01465Q8N7H1 131 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 CYP26B1Q9NR63 512 aa13.51□□□□□ -0.25
CCM2-212ENST00000480382 VTNP04004 478 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 RPLP2P05387 115 aaKnown RBP13.5□□□□□ -0.25
CCM2-212ENST00000480382 SPATA31C1P0DKV0 1188 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 ACTN1P12814 892 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 FXR1P51114 621 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCM2-212ENST00000480382 FOXD4L5Q5VV16 416 aaPredicted RBP13.5□□□□□ -0.25
CCM2-212ENST00000480382 IER5Q5VY09 327 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 FAM109BQ6ICB4 259 aaPredicted RBP13.5□□□□□ -0.25
CCM2-212ENST00000480382 POTEGQ6S5H5 508 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 DTHD1Q6ZMT9 781 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 IGSF22Q8N9C0 903 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 ZNF579Q8NAF0 562 aaKnown RBP13.5□□□□□ -0.25
CCM2-212ENST00000480382 ERMNQ8TAM6 284 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 FOXD4L4Q8WXT5 416 aaPredicted RBP13.5□□□□□ -0.25
CCM2-212ENST00000480382 LRCH3Q96II8 777 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 CEP170P1Q96L14 293 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 MTIF3Q9H2K0 278 aaKnown RBP13.5□□□□□ -0.25
CCM2-212ENST00000480382 SUGCTQ9HAC7 445 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 TUFT1Q9NNX1 390 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 BMP2KQ9NSY1 1161 aaPredicted RBP13.5□□□□□ -0.25
CCM2-212ENST00000480382 LRWD1Q9UFC0 647 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 AKT3Q9Y243 479 aa13.5□□□□□ -0.25
CCM2-212ENST00000480382 A0A087WWV3 80 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 VWA3AA6NCI4 1184 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 PP2D1A8MPX8 630 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 LYPLA2O95372 231 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 TMOD1P28289 359 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 DRP2Q13474 957 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 PKP1Q13835 747 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 LPIN1Q14693 890 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 SF3A1Q15459 793 aaKnown RBP13.49□□□□□ -0.25
CCM2-212ENST00000480382 PLEKHG4Q58EX7 1191 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 XKR9Q5GH70 373 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 FBXO47Q5MNV8 452 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 HAUS3Q68CZ6 603 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 OTUD6AQ7L8S5 288 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 CATSPER3Q86XQ3 398 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 NME8Q8N427 588 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 DBF4BQ8NFT6 615 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 SNX29Q8TEQ0 813 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms