RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 MARCH8Q5T0T0 291 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 LLGL2Q6P1M3 1020 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 TAF2Q6P1X5 1199 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 ERMP1Q7Z2K6 904 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 MICAL1Q8TDZ2 1067 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 NEK1Q96PY6 1258 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 PIGSQ96S52 555 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 EPAS1Q99814 870 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 MAP3K20Q9NYL2 800 aaKnown RBP11.21□□□□□ -0.61
GPNMB-211ENST00000479625 ZSWIM5Q9P217 1185 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 MAD2L2Q9UI95 211 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 PTPRZ1P23471 2315 aaPredicted RBP11.21□□□□□ -0.62
GPNMB-211ENST00000479625 EVPLQ92817 2033 aa11.21□□□□□ -0.62
GPNMB-211ENST00000479625 C2orf16Q68DN1 1984 aa11.21□□□□□ -0.62
GPNMB-211ENST00000479625 KMT2BQ9UMN6 2715 aaPredicted RBP11.21□□□□□ -0.62
GPNMB-211ENST00000479625 ZFHX4Q86UP3 3567 aa11.2□□□□□ -0.62
GPNMB-211ENST00000479625 ARP10275 920 aa11.2□□□□□ -0.62
GPNMB-211ENST00000479625 SCG2P13521 617 aa11.2□□□□□ -0.62
GPNMB-211ENST00000479625 TECP42680 631 aa11.2□□□□□ -0.62
GPNMB-211ENST00000479625 SPOUT1Q5T280 376 aaKnown RBP11.2□□□□□ -0.62
GPNMB-211ENST00000479625 PLPP4Q5VZY2 271 aa11.2□□□□□ -0.62
GPNMB-211ENST00000479625 ANKRD54Q6NXT1 300 aa11.2□□□□□ -0.62
GPNMB-211ENST00000479625 SYCE2Q6PIF2 218 aa11.2□□□□□ -0.62
GPNMB-211ENST00000479625 RSPH3Q86UC2 560 aa11.2□□□□□ -0.62
GPNMB-211ENST00000479625 S1PR5Q9H228 398 aa11.2□□□□□ -0.62
GPNMB-211ENST00000479625 TMX1Q9H3N1 280 aa11.2□□□□□ -0.62
GPNMB-211ENST00000479625 PADI3Q9ULW8 664 aa11.2□□□□□ -0.62
GPNMB-211ENST00000479625 MBLAC1A4D2B0 266 aaPredicted RBP11.19□□□□□ -0.62
GPNMB-211ENST00000479625 C2CD4DB7Z1M9 353 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 BHMG1C9JSJ3 638 aaPredicted RBP11.19□□□□□ -0.62
GPNMB-211ENST00000479625 FGF18O76093 207 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 PDE1AP54750 535 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 PAK2Q13177 524 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 MTMR3Q13615 1198 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 KCNC3Q14003 757 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 TMEM266Q2M3C6 531 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 CCDC178Q5BJE1 867 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 IFIT1BQ5T764 474 aaKnown RBP11.19□□□□□ -0.62
GPNMB-211ENST00000479625 ADSSL1Q8N142 457 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 TRAPPC12Q8WVT3 735 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 NKD2Q969F2 451 aaPredicted RBP11.19□□□□□ -0.62
GPNMB-211ENST00000479625 PKD2L1Q9P0L9 805 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 SORCS3Q9UPU3 1222 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 TRPV2Q9Y5S1 764 aa11.19□□□□□ -0.62
GPNMB-211ENST00000479625 IGSF9BQ9UPX0 1349 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 GSTTP1A0A1W2PQM5 241 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 MED19A0JLT2 244 aaPredicted RBP11.18□□□□□ -0.62
GPNMB-211ENST00000479625 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
GPNMB-211ENST00000479625 HIDE1A8MVS5 230 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 FSCN2O14926 492 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 CYTH3O43739 400 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 MGEA5O60502 916 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 ATP9AO75110 1047 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 STAM2O75886 525 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 ASGR2P07307 311 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 STAG3L1P0CL83 205 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 UBE3AQ05086 875 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 FAM102BQ5T8I3 360 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 THNSL1Q8IYQ7 743 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 SAMD3Q8N6K7 520 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 COLGALT1Q8NBJ5 622 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 PIBF1Q8WXW3 757 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 UBAC1Q9BSL1 405 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 FTHL17Q9BXU8 183 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 POMKQ9H5K3 350 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 TMEM260Q9NX78 707 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 LRFN2Q9ULH4 789 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 PCDHB12Q9Y5F1 795 aa11.18□□□□□ -0.62
GPNMB-211ENST00000479625 WDR81Q562E7 1941 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 TBKBP1A7MCY6 615 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 WEE2P0C1S8 567 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 KCNA2P16389 499 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 SEC23AQ15436 765 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 C6orf132Q5T0Z8 1188 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 ANKRD45Q5TZF3 282 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 CWF19L1Q69YN2 538 aaKnown RBP11.17□□□□□ -0.62
GPNMB-211ENST00000479625 USP17L6PQ6QN14 398 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 CYB5R4Q7L1T6 521 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 GLG1Q92896 1179 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 WNT2BQ93097 391 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 RILPL2Q969X0 211 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 CDCA3Q99618 268 aaPredicted RBP11.17□□□□□ -0.62
GPNMB-211ENST00000479625 TCF25Q9BQ70 676 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 ENTPD7Q9NQZ7 604 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 ERAP1Q9NZ08 941 aa11.17□□□□□ -0.62
GPNMB-211ENST00000479625 MAP3K7O43318 606 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 SRGAP2BP0DMP2 458 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 INSRRP14616 1297 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 PBX3P40426 434 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 SARSP49591 514 aaKnown RBP11.16□□□□□ -0.62
GPNMB-211ENST00000479625 GRM4Q14833 912 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 IER5Q5VY09 327 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 PCNX4Q63HM2 1172 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 TMEM184AQ6ZMB5 413 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 UBALD2Q8IYN6 164 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 FEZF2Q8TBJ5 459 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 PCYT2Q99447 389 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 SENP7Q9BQF6 1050 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 RIOX1Q9H6W3 641 aa11.16□□□□□ -0.62
GPNMB-211ENST00000479625 CWH43Q9H720 699 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms