RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 MAFBQ9Y5Q3 323 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-218ENST00000479554 TCF20Q9UGU0 1960 aaKnown RBP16.21■□□□□ 0.19
ATG4B-218ENST00000479554 WDR64B1ANS9 1081 aa16.21■□□□□ 0.19
ATG4B-218ENST00000479554 ZBTB42B2RXF5 422 aa16.21■□□□□ 0.19
ATG4B-218ENST00000479554 C22orf31O95567 290 aa16.21■□□□□ 0.19
ATG4B-218ENST00000479554 USP11P51784 963 aa16.21■□□□□ 0.19
ATG4B-218ENST00000479554 BTG3Q14201 252 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-218ENST00000479554 TRMT1LQ7Z2T5 733 aaKnown RBP16.21■□□□□ 0.19
ATG4B-218ENST00000479554 NPAS4Q8IUM7 802 aa16.21■□□□□ 0.19
ATG4B-218ENST00000479554 TBCKQ8TEA7 893 aa16.21■□□□□ 0.19
ATG4B-218ENST00000479554 FAM167AQ96KS9 214 aa16.21■□□□□ 0.19
ATG4B-218ENST00000479554 C11orf84Q9BUA3 381 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-218ENST00000479554 UBE2ZQ9H832 354 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-218ENST00000479554 GABBR1Q9UBS5 961 aa16.21■□□□□ 0.19
ATG4B-218ENST00000479554 PCDHA4Q9UN74 947 aa16.21■□□□□ 0.19
ATG4B-218ENST00000479554 CEP131Q9UPN4 1083 aa16.21■□□□□ 0.19
ATG4B-218ENST00000479554 LOXHD1Q8IVV2 1947 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 TTC3P53804 2025 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 C5orf67F2Z3F1 127 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 MSH4O15457 936 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 GAS7O60861 476 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 DGKIO75912 1065 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 RB1P06400 928 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 STAG3L1P0CL83 205 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 ANP32AP39687 249 aaKnown RBP16.2■□□□□ 0.18
ATG4B-218ENST00000479554 NFX1Q12986 1120 aaKnown RBP16.2■□□□□ 0.18
ATG4B-218ENST00000479554 TMEM266Q2M3C6 531 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 KIAA0319LQ8IZA0 1049 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 BANK1Q8NDB2 785 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 CLP1Q92989 425 aaKnown RBP16.2■□□□□ 0.18
ATG4B-218ENST00000479554 ZNF689Q96CS4 500 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-218ENST00000479554 DISC1Q9NRI5 854 aa16.2■□□□□ 0.18
ATG4B-218ENST00000479554 MYH9P35579 1960 aaKnown RBP16.19■□□□□ 0.18
ATG4B-218ENST00000479554 CHMP2AO43633 222 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 EDIL3O43854 480 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 RPS6KA5O75582 802 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 CDKL5O76039 1030 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 LINC00271P0C7V0 271 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 BMPR1AP36894 532 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 ODR4Q5SWX8 454 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 LRCH2Q5VUJ6 765 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 RTN4RL1Q86UN2 441 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-218ENST00000479554 CMTR2Q8IYT2 770 aaKnown RBP16.19■□□□□ 0.18
ATG4B-218ENST00000479554 BLIDQ8IZY5 108 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 FAM177A1Q8N128 213 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-218ENST00000479554 METTL13Q8N6R0 699 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 DAGLBQ8NCG7 672 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 PPP1R16BQ96T49 567 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 RIT2Q99578 217 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 TEKT3Q9BXF9 490 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 TMX1Q9H3N1 280 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 ERVK-5Q9HDB9 667 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 LRFN2Q9ULH4 789 aa16.19■□□□□ 0.18
ATG4B-218ENST00000479554 NOC2LQ9Y3T9 749 aaKnown RBP16.19■□□□□ 0.18
ATG4B-218ENST00000479554 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-218ENST00000479554 EIF5BO60841 1220 aaKnown RBP16.18■□□□□ 0.18
ATG4B-218ENST00000479554 VTNP04004 478 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 OATP04181 439 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 IBSPP21815 317 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-218ENST00000479554 KCNA5P22460 613 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 SFNP31947 248 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 PRKCEQ02156 737 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 KIZQ2M2Z5 673 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 TCEAL5Q5H9L2 206 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 GALNT17Q6IS24 598 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 FAM43BQ6ZT52 329 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-218ENST00000479554 CRIPAKQ8N1N5 446 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 TMEM40Q8WWA1 233 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 SLC5A5Q92911 643 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 AIFM3Q96NN9 605 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 OSMRQ99650 979 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 LMAN2LQ9H0V9 348 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 UNC45AQ9H3U1 944 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 NSUN3Q9H649 340 aaKnown RBP16.18■□□□□ 0.18
ATG4B-218ENST00000479554 CDHR5Q9HBB8 845 aa16.18■□□□□ 0.18
ATG4B-218ENST00000479554 MRPL42Q9Y6G3 142 aaKnown RBP16.18■□□□□ 0.18
ATG4B-218ENST00000479554 DENND3A2RUS2 1198 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 M0R2N6 131 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 GPR182O15218 404 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 MAGEB2O15479 319 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 ZNF862O60290 1169 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 MGEA5O60502 916 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 TDP2O95551 362 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 SARSP49591 514 aaKnown RBP16.17■□□□□ 0.18
ATG4B-218ENST00000479554 CLCN3P51790 818 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 JAK3P52333 1124 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 CRYBB1P53674 252 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-218ENST00000479554 SCRN1Q12765 414 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 NONOQ15233 471 aaKnown RBP eCLIP16.17■□□□□ 0.18
ATG4B-218ENST00000479554 Q4G0T1 1027 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 PAN2Q504Q3 1202 aaKnown RBP16.17■□□□□ 0.18
ATG4B-218ENST00000479554 MAP7D2Q96T17 732 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 PLVAPQ9BX97 442 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 UPF2Q9HAU5 1272 aaKnown RBP16.17■□□□□ 0.18
ATG4B-218ENST00000479554 NRBP2Q9NSY0 501 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 ST3GAL5Q9UNP4 418 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 AKT3Q9Y243 479 aa16.17■□□□□ 0.18
ATG4B-218ENST00000479554 EVPLQ92817 2033 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 NCOR1O75376 2440 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 GRM6O15303 877 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms