RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-208ENST00000479530 MED24O75448 989 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 KIF4AO95239 1232 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 CEP57Q86XR8 500 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 MDM1Q8TC05 714 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 CELF4Q9BZC1 486 aaKnown RBP14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 MCM8Q9UJA3 840 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 PCDHA1Q9Y5I3 950 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 GOLGA6L7A0A1B0GV03 622 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 CASP5P51878 434 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 MAGOHP61326 146 aaKnown RBP14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 PREPLQ4J6C6 727 aaPredicted RBP14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 LRIG3Q6UXM1 1119 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 ZNF571Q7Z3V5 609 aaPredicted RBP14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 TAF4BQ92750 862 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 SYN2Q92777 582 aaPredicted RBP14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 MAGOHBQ96A72 148 aaKnown RBP14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 TSG101Q99816 390 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 ZHX3Q9H4I2 956 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 GGA2Q9UJY4 613 aa14.53□□□□□ -0.08
PDZRN3-208ENST00000479530 THSD7AQ9UPZ6 1657 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 POTEFA5A3E0 1075 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 CLSTN1O94985 981 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 POTEIP0CG38 1075 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 ZBTB48P10074 688 aaPredicted RBP14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 RDXP35241 583 aaKnown RBP14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 SEPT2Q15019 361 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 PLCB4Q15147 1175 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 ARSHQ5FYA8 562 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 POTEGQ6S5H5 508 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 POTEEQ6S8J3 1075 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 METTL13Q8N6R0 699 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 SUFUQ9UMX1 484 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 PCDHA2Q9Y5H9 948 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 LY75O60449 1722 aa14.52□□□□□ -0.08
PDZRN3-208ENST00000479530 GDF11O95390 407 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 PLA2G4BP0C869 781 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 MRPL12P52815 198 aaKnown RBP14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 PPP2R2AP63151 447 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 FAM26FQ5R3K3 315 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 EP400NLQ6ZTU2 488 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 TRIM59Q8IWR1 403 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 PARP9Q8IXQ6 854 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 ARFGAP2Q8N6H7 521 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 LRRC57Q8N9N7 239 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 CYP2W1Q8TAV3 490 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 GANQ9H2C0 597 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 NOC2LQ9Y3T9 749 aaKnown RBP14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 ADAMTSL1Q8N6G6 1762 aa14.52□□□□□ -0.09
PDZRN3-208ENST00000479530 SCP2P22307 547 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 CRKP46108 304 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 SCTRP47872 440 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 USP11P51784 963 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 E2F5Q15329 346 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 ASIC2Q16515 512 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 USH1GQ495M9 461 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 GPBP1Q86WP2 473 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 SCFD1Q8WVM8 642 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 SCLT1Q96NL6 688 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 IKZF4Q9H2S9 585 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 AIPL1Q9NZN9 384 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 TPX2Q9ULW0 747 aaKnown RBP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 MYH7BA7E2Y1 1941 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 MEIS2O14770 477 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 TTI1O43156 1089 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 SLC9A1P19634 815 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 POLD1P28340 1107 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 CDR1P51861 262 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 CUL1Q13616 776 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 HERC4Q5GLZ8 1057 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 MSL1Q68DK7 614 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 IRF2BP2Q7Z5L9 587 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 N4BP2L2Q92802 583 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 RAB34Q9BZG1 259 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 DPH5Q9H2P9 285 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 LUC7LQ9NQ29 371 aaKnown RBP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 FAM198AQ9UFP1 575 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 NR2E1Q9Y466 385 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 BHMG1C9JSJ3 638 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 hCG_1984214I3L0E3 225 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 ONECUT3O60422 494 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 ECM2O94769 699 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 RBM5P52756 815 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 ORC2Q13416 577 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 NEDD9Q14511 834 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 WLSQ5T9L3 541 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 ZNF713Q8N859 430 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 GIMAP7Q8NHV1 300 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 TEKT1Q969V4 418 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 TRIM31Q9BZY9 425 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 NUCKS1Q9H1E3 243 aaKnown RBP14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 DONSONQ9NYP3 566 aa14.51□□□□□ -0.09
PDZRN3-208ENST00000479530 SRRM3A6NNA2 597 aaPredicted RBP14.5□□□□□ -0.09
PDZRN3-208ENST00000479530 TMCO5BA8MYB1 307 aa14.5□□□□□ -0.09
PDZRN3-208ENST00000479530 G3V3G9 751 aa14.5□□□□□ -0.09
PDZRN3-208ENST00000479530 KRIT1O00522 736 aa14.5□□□□□ -0.09
PDZRN3-208ENST00000479530 CYP11B2P19099 503 aa14.5□□□□□ -0.09
PDZRN3-208ENST00000479530 ELF1P32519 619 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms