RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 EVCP57679 992 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 SETQ01105 290 aaPredicted RBP19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 BTG3Q14201 252 aaPredicted RBP19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 KIZQ2M2Z5 673 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 TCEAL5Q5H9L2 206 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 KIAA0319LQ8IZA0 1049 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 METTL13Q8N6R0 699 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 OSMRQ99650 979 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 SH2D3AQ9BRG2 576 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 UBE2ZQ9H832 354 aaPredicted RBP19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 RC3H2Q9HBD1 1191 aaKnown RBP19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 HCSTQ9UBK5 93 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 COG5Q9UP83 839 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 TMEM150BA6NC51 233 aa19.69■□□□□ 0.74
ECHDC1-216ENST00000479525 GRM6O15303 877 aa19.69■□□□□ 0.74
ECHDC1-216ENST00000479525 C22orf31O95567 290 aa19.69■□□□□ 0.74
ECHDC1-216ENST00000479525 LRRC71Q8N4P6 559 aa19.69■□□□□ 0.74
ECHDC1-216ENST00000479525 BICD2Q8TD16 824 aa19.69■□□□□ 0.74
ECHDC1-216ENST00000479525 MRPL38Q96DV4 380 aaKnown RBP19.69■□□□□ 0.74
ECHDC1-216ENST00000479525 UNC45AQ9H3U1 944 aa19.69■□□□□ 0.74
ECHDC1-216ENST00000479525 TBC1D22BQ9NU19 505 aa19.69■□□□□ 0.74
ECHDC1-216ENST00000479525 MRPL42Q9Y6G3 142 aaKnown RBP19.69■□□□□ 0.74
ECHDC1-216ENST00000479525 C5orf42Q9H799 3197 aa19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 H3BQ06 376 aaPredicted RBP19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 ZNF862O60290 1169 aa19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 PSAPP07602 524 aa19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 CIITAP33076 1130 aa19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 SCRN1Q12765 414 aa19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 NPY5RQ15761 445 aa19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 AAK1Q2M2I8 961 aa19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 ZNF746Q6NUN9 644 aaPredicted RBP19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 TRIM22Q8IYM9 498 aa19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 ZNF689Q96CS4 500 aaPredicted RBP19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 ALG13Q9NP73 1137 aaKnown RBP19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 LMCD1Q9NZU5 365 aa19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 PCDHA4Q9UN74 947 aa19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 PCDHA10Q9Y5I2 948 aa19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 MAFBQ9Y5Q3 323 aaPredicted RBP19.68■□□□□ 0.74
ECHDC1-216ENST00000479525 DGKIO75912 1065 aa19.67■□□□□ 0.74
ECHDC1-216ENST00000479525 GTF2F1P35269 517 aaKnown RBP eCLIP19.67■□□□□ 0.74
ECHDC1-216ENST00000479525 SLC26A2P50443 739 aa19.67■□□□□ 0.74
ECHDC1-216ENST00000479525 FOSBP53539 338 aa19.67■□□□□ 0.74
ECHDC1-216ENST00000479525 ZNF484Q5JVG2 852 aa19.67■□□□□ 0.74
ECHDC1-216ENST00000479525 TEX2Q8IWB9 1127 aa19.67■□□□□ 0.74
ECHDC1-216ENST00000479525 BLIDQ8IZY5 108 aa19.67■□□□□ 0.74
ECHDC1-216ENST00000479525 BANK1Q8NDB2 785 aa19.67■□□□□ 0.74
ECHDC1-216ENST00000479525 KHSRPQ92945 711 aaKnown RBP eCLIP19.67■□□□□ 0.742e-12■■■□□ 17
ECHDC1-216ENST00000479525 ERVK-5Q9HDB9 667 aa19.67■□□□□ 0.74
ECHDC1-216ENST00000479525 DISC1Q9NRI5 854 aa19.67■□□□□ 0.74
ECHDC1-216ENST00000479525 TPCN1Q9ULQ1 816 aa19.67■□□□□ 0.74
ECHDC1-216ENST00000479525 GAS7O60861 476 aa19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 RPS6KA5O75582 802 aa19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 DEXIO95424 95 aa19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 IL9P15248 144 aa19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 PRKCEQ02156 737 aa19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 INF2Q27J81 1249 aa19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 LRCH2Q5VUJ6 765 aa19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 FAM228AQ86W67 206 aa19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 BBXQ8WY36 941 aaPredicted RBP19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 TNPO1Q92973 898 aaKnown RBP19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 ZNF274Q96GC6 653 aaPredicted RBP19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 SAMD11Q96NU1 681 aa19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 COL1A2P08123 1366 aa19.66■□□□□ 0.74
ECHDC1-216ENST00000479525 WDR64B1ANS9 1081 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 LARGE1O95461 756 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 FGFR4P22455 802 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 BMPR1AP36894 532 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 CLUL1Q15846 466 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 SMAP1Q8IYB5 467 aaPredicted RBP19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 SLC5A5Q92911 643 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 ADAM2Q99965 735 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 TEKT3Q9BXF9 490 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 TM6SF1Q9BZW5 370 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 CD320Q9NPF0 282 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 SH3GLB2Q9NR46 395 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 LRFN2Q9ULH4 789 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 ST3GAL5Q9UNP4 418 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 AKT3Q9Y243 479 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 PCDHGC5Q9Y5F6 944 aa19.65■□□□□ 0.74
ECHDC1-216ENST00000479525 NCOR1O75376 2440 aa19.64■□□□□ 0.74
ECHDC1-216ENST00000479525 M0R2N6 131 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 SLC37A4O43826 429 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 PTPROQ16827 1216 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 FAM102BQ5T8I3 360 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 MCTP2Q6DN12 878 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 EFCAB12Q6NXP0 572 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 NPAS4Q8IUM7 802 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 NME8Q8N427 588 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 NECAB1Q8N987 351 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 OXER1Q8TDS5 423 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 IGFLR1Q9H665 355 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 PPP4R2Q9NY27 417 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 KDM3AQ9Y4C1 1321 aa19.64■□□□□ 0.73
ECHDC1-216ENST00000479525 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 FAM205CA6NFA0 338 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 GPR32O75388 356 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 CSDE1O75534 798 aaKnown RBP19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 OATP04181 439 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 DNAJB1P25685 340 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms